Gene : Thecc1EG000931 T. cacao v1.1
Defline:  (1 of 3) PTHR11945//PTHR11945:SF144 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL17-RELATED Genomic Order:  820
Name:  ? Thecc1EG000931 Secondary Identifier:  ? PAC:27431586
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000931 0.5kb upstream 0.5kb upstream 10670 true scaffold_1: 4225830-4236499 Theobroma cacao
Thecc1EG000931 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 4236000-4236499 Theobroma cacao
Thecc1EG000931 0.5kb downstream 0.5kb downstream 10670 true scaffold_1: 4225330-4235999 Theobroma cacao
Thecc1EG000931 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 4225330-4225829 Theobroma cacao
Thecc1EG000931 1.0kb upstream 1.0kb upstream 11170 true scaffold_1: 4225830-4236999 Theobroma cacao
Thecc1EG000931 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 4236000-4236999 Theobroma cacao
Thecc1EG000931 1.0kb downstream 1.0kb downstream 11170 true scaffold_1: 4224830-4235999 Theobroma cacao
Thecc1EG000931 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 4224830-4225829 Theobroma cacao
Thecc1EG000931 2.0kb upstream 2.0kb upstream 12170 true scaffold_1: 4225830-4237999 Theobroma cacao
Thecc1EG000931 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 4236000-4237999 Theobroma cacao
Thecc1EG000931 2.0kb downstream 2.0kb downstream 12170 true scaffold_1: 4223830-4235999 Theobroma cacao
Thecc1EG000931 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 4223830-4225829 Theobroma cacao
Thecc1EG000931 5.0kb upstream 5.0kb upstream 15170 true scaffold_1: 4225830-4240999 Theobroma cacao
Thecc1EG000931 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 4236000-4240999 Theobroma cacao
Thecc1EG000931 5.0kb downstream 5.0kb downstream 15170 true scaffold_1: 4220830-4235999 Theobroma cacao
Thecc1EG000931 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 4220830-4225829 Theobroma cacao
Thecc1EG000931 10.0kb upstream 10.0kb upstream 20170 true scaffold_1: 4225830-4245999 Theobroma cacao
Thecc1EG000931 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 4236000-4245999 Theobroma cacao
Thecc1EG000931 10.0kb downstream 10.0kb downstream 20170 true scaffold_1: 4215830-4235999 Theobroma cacao
Thecc1EG000931 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 4215830-4225829 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841544 5264 Brassicales-Malvales View MSA
124351591 5266 SBM View MSA
124253386 5268 Malvidae View MSA
124074630 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain