Gene : Thecc1EG000925 T. cacao v1.1

Defline:  (1 of 1) K05752 - chromosome 3 open reading frame 10 (C3ORF10, HSPC300) Genomic Order:  814
Name:  ? Thecc1EG000925 Secondary Identifier:  ? PAC:27431830

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG000925 0.5kb upstream 0.5kb upstream 2182 true scaffold_1: 4202082-4204263 Theobroma cacao
Thecc1EG000925 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 4203764-4204263 Theobroma cacao
Thecc1EG000925 0.5kb downstream 0.5kb downstream 2182 true scaffold_1: 4201582-4203763 Theobroma cacao
Thecc1EG000925 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 4201582-4202081 Theobroma cacao
Thecc1EG000925 1.0kb upstream 1.0kb upstream 2682 true scaffold_1: 4202082-4204763 Theobroma cacao
Thecc1EG000925 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 4203764-4204763 Theobroma cacao
Thecc1EG000925 1.0kb downstream 1.0kb downstream 2682 true scaffold_1: 4201082-4203763 Theobroma cacao
Thecc1EG000925 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 4201082-4202081 Theobroma cacao
Thecc1EG000925 2.0kb upstream 2.0kb upstream 3682 true scaffold_1: 4202082-4205763 Theobroma cacao
Thecc1EG000925 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 4203764-4205763 Theobroma cacao
Thecc1EG000925 2.0kb downstream 2.0kb downstream 3682 true scaffold_1: 4200082-4203763 Theobroma cacao
Thecc1EG000925 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 4200082-4202081 Theobroma cacao
Thecc1EG000925 5.0kb upstream 5.0kb upstream 6682 true scaffold_1: 4202082-4208763 Theobroma cacao
Thecc1EG000925 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 4203764-4208763 Theobroma cacao
Thecc1EG000925 5.0kb downstream 5.0kb downstream 6682 true scaffold_1: 4197082-4203763 Theobroma cacao
Thecc1EG000925 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 4197082-4202081 Theobroma cacao
Thecc1EG000925 10.0kb upstream 10.0kb upstream 11682 true scaffold_1: 4202082-4213763 Theobroma cacao
Thecc1EG000925 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 4203764-4213763 Theobroma cacao
Thecc1EG000925 10.0kb downstream 10.0kb downstream 11682 true scaffold_1: 4192082-4203763 Theobroma cacao
Thecc1EG000925 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 4192082-4202081 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839904 5264 Brassicales-Malvales View MSA
124341122 5266 SBM View MSA
124247495 5268 Malvidae View MSA
124051100 5270 Rosid View MSA
123747984 5271 Pentapetalae View MSA
122786023 5272 Eudicot View MSA
122047228 5273 Angiosperm View MSA
121347694 5274 Embryophyte View MSA
123380603 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain