Gene : Thecc1EG001137 T. cacao v1.1
Defline:  (1 of 1) PTHR12151//PTHR12151:SF1 - SCO1/SENC // PROTEIN SCO1 HOMOLOG 2, MITOCHONDRIAL Genomic Order:  995
Name:  ? Thecc1EG001137 Secondary Identifier:  ? PAC:27434451
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG001137 0.5kb upstream 0.5kb upstream 4095 true scaffold_1: 5436115-5440209 Theobroma cacao
Thecc1EG001137 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 5436115-5436614 Theobroma cacao
Thecc1EG001137 0.5kb downstream 0.5kb downstream 4095 true scaffold_1: 5436615-5440709 Theobroma cacao
Thecc1EG001137 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 5440210-5440709 Theobroma cacao
Thecc1EG001137 1.0kb upstream 1.0kb upstream 4595 true scaffold_1: 5435615-5440209 Theobroma cacao
Thecc1EG001137 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 5435615-5436614 Theobroma cacao
Thecc1EG001137 1.0kb downstream 1.0kb downstream 4595 true scaffold_1: 5436615-5441209 Theobroma cacao
Thecc1EG001137 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 5440210-5441209 Theobroma cacao
Thecc1EG001137 2.0kb upstream 2.0kb upstream 5595 true scaffold_1: 5434615-5440209 Theobroma cacao
Thecc1EG001137 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 5434615-5436614 Theobroma cacao
Thecc1EG001137 2.0kb downstream 2.0kb downstream 5595 true scaffold_1: 5436615-5442209 Theobroma cacao
Thecc1EG001137 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 5440210-5442209 Theobroma cacao
Thecc1EG001137 5.0kb upstream 5.0kb upstream 8595 true scaffold_1: 5431615-5440209 Theobroma cacao
Thecc1EG001137 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 5431615-5436614 Theobroma cacao
Thecc1EG001137 5.0kb downstream 5.0kb downstream 8595 true scaffold_1: 5436615-5445209 Theobroma cacao
Thecc1EG001137 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 5440210-5445209 Theobroma cacao
Thecc1EG001137 10.0kb upstream 10.0kb upstream 13595 true scaffold_1: 5426615-5440209 Theobroma cacao
Thecc1EG001137 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 5426615-5436614 Theobroma cacao
Thecc1EG001137 10.0kb downstream 10.0kb downstream 13595 true scaffold_1: 5436615-5450209 Theobroma cacao
Thecc1EG001137 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 5440210-5450209 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834503 5264 Brassicales-Malvales View MSA
124343487 5266 SBM View MSA
124238961 5268 Malvidae View MSA
124068864 5270 Rosid View MSA
123740394 5271 Pentapetalae View MSA
122793791 5272 Eudicot View MSA
122046621 5273 Angiosperm View MSA
121343822 5274 Embryophyte View MSA
123427619 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain