Gene : Thecc1EG001127 T. cacao v1.1
Defline:  (1 of 1) PTHR22904//PTHR22904:SF379 - TPR REPEAT CONTAINING PROTEIN // RING ZINC FINGER-CONTAINING PROTEIN Genomic Order:  986
Name:  ? Thecc1EG001127 Secondary Identifier:  ? PAC:27435981
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG001127 0.5kb upstream 0.5kb upstream 17784 true scaffold_1: 5373203-5390986 Theobroma cacao
Thecc1EG001127 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 5390487-5390986 Theobroma cacao
Thecc1EG001127 0.5kb downstream 0.5kb downstream 17784 true scaffold_1: 5372703-5390486 Theobroma cacao
Thecc1EG001127 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 5372703-5373202 Theobroma cacao
Thecc1EG001127 1.0kb upstream 1.0kb upstream 18284 true scaffold_1: 5373203-5391486 Theobroma cacao
Thecc1EG001127 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 5390487-5391486 Theobroma cacao
Thecc1EG001127 1.0kb downstream 1.0kb downstream 18284 true scaffold_1: 5372203-5390486 Theobroma cacao
Thecc1EG001127 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 5372203-5373202 Theobroma cacao
Thecc1EG001127 2.0kb upstream 2.0kb upstream 19284 true scaffold_1: 5373203-5392486 Theobroma cacao
Thecc1EG001127 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 5390487-5392486 Theobroma cacao
Thecc1EG001127 2.0kb downstream 2.0kb downstream 19284 true scaffold_1: 5371203-5390486 Theobroma cacao
Thecc1EG001127 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 5371203-5373202 Theobroma cacao
Thecc1EG001127 5.0kb upstream 5.0kb upstream 22284 true scaffold_1: 5373203-5395486 Theobroma cacao
Thecc1EG001127 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 5390487-5395486 Theobroma cacao
Thecc1EG001127 5.0kb downstream 5.0kb downstream 22284 true scaffold_1: 5368203-5390486 Theobroma cacao
Thecc1EG001127 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 5368203-5373202 Theobroma cacao
Thecc1EG001127 10.0kb upstream 10.0kb upstream 27284 true scaffold_1: 5373203-5400486 Theobroma cacao
Thecc1EG001127 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 5390487-5400486 Theobroma cacao
Thecc1EG001127 10.0kb downstream 10.0kb downstream 27284 true scaffold_1: 5363203-5390486 Theobroma cacao
Thecc1EG001127 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 5363203-5373202 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041067 5273 Angiosperm View MSA
123832240 5264 Brassicales-Malvales View MSA
124338232 5266 SBM View MSA
124240384 5268 Malvidae View MSA
124050138 5270 Rosid View MSA
123736944 5271 Pentapetalae View MSA
122792971 5272 Eudicot View MSA
121347266 5274 Embryophyte View MSA
123380522 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain