Gene : Thecc1EG001129 T. cacao v1.1
Defline:  Mediator of RNA polymerase II transcription subunit 26 Genomic Order:  987
Name:  ? Thecc1EG001129 Secondary Identifier:  ? PAC:27431744
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG001129 0.5kb upstream 0.5kb upstream 8024 true scaffold_1: 5390889-5398912 Theobroma cacao
Thecc1EG001129 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 5398413-5398912 Theobroma cacao
Thecc1EG001129 0.5kb downstream 0.5kb downstream 8024 true scaffold_1: 5390389-5398412 Theobroma cacao
Thecc1EG001129 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 5390389-5390888 Theobroma cacao
Thecc1EG001129 1.0kb upstream 1.0kb upstream 8524 true scaffold_1: 5390889-5399412 Theobroma cacao
Thecc1EG001129 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 5398413-5399412 Theobroma cacao
Thecc1EG001129 1.0kb downstream 1.0kb downstream 8524 true scaffold_1: 5389889-5398412 Theobroma cacao
Thecc1EG001129 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 5389889-5390888 Theobroma cacao
Thecc1EG001129 2.0kb upstream 2.0kb upstream 9524 true scaffold_1: 5390889-5400412 Theobroma cacao
Thecc1EG001129 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 5398413-5400412 Theobroma cacao
Thecc1EG001129 2.0kb downstream 2.0kb downstream 9524 true scaffold_1: 5388889-5398412 Theobroma cacao
Thecc1EG001129 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 5388889-5390888 Theobroma cacao
Thecc1EG001129 5.0kb upstream 5.0kb upstream 12524 true scaffold_1: 5390889-5403412 Theobroma cacao
Thecc1EG001129 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 5398413-5403412 Theobroma cacao
Thecc1EG001129 5.0kb downstream 5.0kb downstream 12524 true scaffold_1: 5385889-5398412 Theobroma cacao
Thecc1EG001129 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 5385889-5390888 Theobroma cacao
Thecc1EG001129 10.0kb upstream 10.0kb upstream 17524 true scaffold_1: 5390889-5408412 Theobroma cacao
Thecc1EG001129 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 5398413-5408412 Theobroma cacao
Thecc1EG001129 10.0kb downstream 10.0kb downstream 17524 true scaffold_1: 5380889-5398412 Theobroma cacao
Thecc1EG001129 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 5380889-5390888 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832632 5264 Brassicales-Malvales View MSA
124341954 5266 SBM View MSA
124247451 5268 Malvidae View MSA
124050391 5270 Rosid View MSA
123747587 5271 Pentapetalae View MSA
122791457 5272 Eudicot View MSA
122044474 5273 Angiosperm View MSA
121310300 5274 Embryophyte View MSA
123347823 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain