Gene : Thecc1EG001102 T. cacao v1.1

Defline:  (1 of 2) PTHR10641//PTHR10641:SF537 - MYB-LIKE DNA-BINDING PROTEIN MYB // F21H2.9 PROTEIN-RELATED Genomic Order:  965
Name:  ? Thecc1EG001102 Secondary Identifier:  ? PAC:27435392

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG001102 0.5kb upstream 0.5kb upstream 5157 true scaffold_1: 5242419-5247575 Theobroma cacao
Thecc1EG001102 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 5247076-5247575 Theobroma cacao
Thecc1EG001102 0.5kb downstream 0.5kb downstream 5157 true scaffold_1: 5241919-5247075 Theobroma cacao
Thecc1EG001102 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 5241919-5242418 Theobroma cacao
Thecc1EG001102 1.0kb upstream 1.0kb upstream 5657 true scaffold_1: 5242419-5248075 Theobroma cacao
Thecc1EG001102 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 5247076-5248075 Theobroma cacao
Thecc1EG001102 1.0kb downstream 1.0kb downstream 5657 true scaffold_1: 5241419-5247075 Theobroma cacao
Thecc1EG001102 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 5241419-5242418 Theobroma cacao
Thecc1EG001102 2.0kb upstream 2.0kb upstream 6657 true scaffold_1: 5242419-5249075 Theobroma cacao
Thecc1EG001102 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 5247076-5249075 Theobroma cacao
Thecc1EG001102 2.0kb downstream 2.0kb downstream 6657 true scaffold_1: 5240419-5247075 Theobroma cacao
Thecc1EG001102 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 5240419-5242418 Theobroma cacao
Thecc1EG001102 5.0kb upstream 5.0kb upstream 9657 true scaffold_1: 5242419-5252075 Theobroma cacao
Thecc1EG001102 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 5247076-5252075 Theobroma cacao
Thecc1EG001102 5.0kb downstream 5.0kb downstream 9657 true scaffold_1: 5237419-5247075 Theobroma cacao
Thecc1EG001102 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 5237419-5242418 Theobroma cacao
Thecc1EG001102 10.0kb upstream 10.0kb upstream 14657 true scaffold_1: 5242419-5257075 Theobroma cacao
Thecc1EG001102 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 5247076-5257075 Theobroma cacao
Thecc1EG001102 10.0kb downstream 10.0kb downstream 14657 true scaffold_1: 5232419-5247075 Theobroma cacao
Thecc1EG001102 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 5232419-5242418 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123825549 5264 Brassicales-Malvales View MSA
124348106 5266 SBM View MSA
124250352 5268 Malvidae View MSA
124071827 5270 Rosid View MSA
123751213 5271 Pentapetalae View MSA
122792208 5272 Eudicot View MSA
122045229 5273 Angiosperm View MSA
121310421 5274 Embryophyte View MSA
123347909 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain