Gene : Thecc1EG001087 T. cacao v1.1
Defline:  (1 of 1) PTHR10992//PTHR10992:SF792 - ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  953
Name:  ? Thecc1EG001087 Secondary Identifier:  ? PAC:27435475
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao LIPAS-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG001087 0.5kb upstream 0.5kb upstream 4228 true scaffold_1: 5143576-5147803 Theobroma cacao
Thecc1EG001087 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 5147304-5147803 Theobroma cacao
Thecc1EG001087 0.5kb downstream 0.5kb downstream 4228 true scaffold_1: 5143076-5147303 Theobroma cacao
Thecc1EG001087 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 5143076-5143575 Theobroma cacao
Thecc1EG001087 1.0kb upstream 1.0kb upstream 4728 true scaffold_1: 5143576-5148303 Theobroma cacao
Thecc1EG001087 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 5147304-5148303 Theobroma cacao
Thecc1EG001087 1.0kb downstream 1.0kb downstream 4728 true scaffold_1: 5142576-5147303 Theobroma cacao
Thecc1EG001087 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 5142576-5143575 Theobroma cacao
Thecc1EG001087 2.0kb upstream 2.0kb upstream 5728 true scaffold_1: 5143576-5149303 Theobroma cacao
Thecc1EG001087 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 5147304-5149303 Theobroma cacao
Thecc1EG001087 2.0kb downstream 2.0kb downstream 5728 true scaffold_1: 5141576-5147303 Theobroma cacao
Thecc1EG001087 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 5141576-5143575 Theobroma cacao
Thecc1EG001087 5.0kb upstream 5.0kb upstream 8728 true scaffold_1: 5143576-5152303 Theobroma cacao
Thecc1EG001087 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 5147304-5152303 Theobroma cacao
Thecc1EG001087 5.0kb downstream 5.0kb downstream 8728 true scaffold_1: 5138576-5147303 Theobroma cacao
Thecc1EG001087 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 5138576-5143575 Theobroma cacao
Thecc1EG001087 10.0kb upstream 10.0kb upstream 13728 true scaffold_1: 5143576-5157303 Theobroma cacao
Thecc1EG001087 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 5147304-5157303 Theobroma cacao
Thecc1EG001087 10.0kb downstream 10.0kb downstream 13728 true scaffold_1: 5133576-5147303 Theobroma cacao
Thecc1EG001087 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 5133576-5143575 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841298 5264 Brassicales-Malvales View MSA
124342133 5266 SBM View MSA
124239723 5268 Malvidae View MSA
124070444 5270 Rosid View MSA
123749753 5271 Pentapetalae View MSA
122790165 5272 Eudicot View MSA
122050369 5273 Angiosperm View MSA
123428977 5275 Viridiplantae View MSA
121351643 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain