Gene : Thecc1EG001080 T. cacao v1.1

Defline:  (1 of 4) PTHR11926//PTHR11926:SF269 - GLUCOSYL/GLUCURONOSYL TRANSFERASES // SUBFAMILY NOT NAMED Genomic Order:  947
Name:  ? Thecc1EG001080 Secondary Identifier:  ? PAC:27434886

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG001080 0.5kb upstream 0.5kb upstream 2840 true scaffold_1: 5113788-5116627 Theobroma cacao
Thecc1EG001080 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 5113788-5114287 Theobroma cacao
Thecc1EG001080 0.5kb downstream 0.5kb downstream 2840 true scaffold_1: 5114288-5117127 Theobroma cacao
Thecc1EG001080 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 5116628-5117127 Theobroma cacao
Thecc1EG001080 1.0kb upstream 1.0kb upstream 3340 true scaffold_1: 5113288-5116627 Theobroma cacao
Thecc1EG001080 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 5113288-5114287 Theobroma cacao
Thecc1EG001080 1.0kb downstream 1.0kb downstream 3340 true scaffold_1: 5114288-5117627 Theobroma cacao
Thecc1EG001080 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 5116628-5117627 Theobroma cacao
Thecc1EG001080 2.0kb upstream 2.0kb upstream 4340 true scaffold_1: 5112288-5116627 Theobroma cacao
Thecc1EG001080 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 5112288-5114287 Theobroma cacao
Thecc1EG001080 2.0kb downstream 2.0kb downstream 4340 true scaffold_1: 5114288-5118627 Theobroma cacao
Thecc1EG001080 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 5116628-5118627 Theobroma cacao
Thecc1EG001080 5.0kb upstream 5.0kb upstream 7340 true scaffold_1: 5109288-5116627 Theobroma cacao
Thecc1EG001080 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 5109288-5114287 Theobroma cacao
Thecc1EG001080 5.0kb downstream 5.0kb downstream 7340 true scaffold_1: 5114288-5121627 Theobroma cacao
Thecc1EG001080 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 5116628-5121627 Theobroma cacao
Thecc1EG001080 10.0kb upstream 10.0kb upstream 12340 true scaffold_1: 5104288-5116627 Theobroma cacao
Thecc1EG001080 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 5104288-5114287 Theobroma cacao
Thecc1EG001080 10.0kb downstream 10.0kb downstream 12340 true scaffold_1: 5114288-5126627 Theobroma cacao
Thecc1EG001080 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 5116628-5126627 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123842899 5264 Brassicales-Malvales View MSA
124348945 5266 SBM View MSA
124252141 5268 Malvidae View MSA
124074622 5270 Rosid View MSA
123753607 5271 Pentapetalae View MSA
122797779 5272 Eudicot View MSA
122051696 5273 Angiosperm View MSA
121351097 5274 Embryophyte View MSA
123428681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain