Gene : Thecc1EG001056 T. cacao v1.1

Defline:  (1 of 15) K07904 - Ras-related protein Rab-11A (RAB11A) Genomic Order:  932
Name:  ? Thecc1EG001056 Secondary Identifier:  ? PAC:27431375

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG001056 0.5kb upstream 0.5kb upstream 3025 true scaffold_1: 5007059-5010083 Theobroma cacao
Thecc1EG001056 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 5009584-5010083 Theobroma cacao
Thecc1EG001056 0.5kb downstream 0.5kb downstream 3025 true scaffold_1: 5006559-5009583 Theobroma cacao
Thecc1EG001056 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 5006559-5007058 Theobroma cacao
Thecc1EG001056 1.0kb upstream 1.0kb upstream 3525 true scaffold_1: 5007059-5010583 Theobroma cacao
Thecc1EG001056 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 5009584-5010583 Theobroma cacao
Thecc1EG001056 1.0kb downstream 1.0kb downstream 3525 true scaffold_1: 5006059-5009583 Theobroma cacao
Thecc1EG001056 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 5006059-5007058 Theobroma cacao
Thecc1EG001056 2.0kb upstream 2.0kb upstream 4525 true scaffold_1: 5007059-5011583 Theobroma cacao
Thecc1EG001056 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 5009584-5011583 Theobroma cacao
Thecc1EG001056 2.0kb downstream 2.0kb downstream 4525 true scaffold_1: 5005059-5009583 Theobroma cacao
Thecc1EG001056 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 5005059-5007058 Theobroma cacao
Thecc1EG001056 5.0kb upstream 5.0kb upstream 7525 true scaffold_1: 5007059-5014583 Theobroma cacao
Thecc1EG001056 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 5009584-5014583 Theobroma cacao
Thecc1EG001056 5.0kb downstream 5.0kb downstream 7525 true scaffold_1: 5002059-5009583 Theobroma cacao
Thecc1EG001056 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 5002059-5007058 Theobroma cacao
Thecc1EG001056 10.0kb upstream 10.0kb upstream 12525 true scaffold_1: 5007059-5019583 Theobroma cacao
Thecc1EG001056 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 5009584-5019583 Theobroma cacao
Thecc1EG001056 10.0kb downstream 10.0kb downstream 12525 true scaffold_1: 4997059-5009583 Theobroma cacao
Thecc1EG001056 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 4997059-5007058 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839371 5264 Brassicales-Malvales View MSA
124337638 5266 SBM View MSA
124250798 5268 Malvidae View MSA
124067588 5270 Rosid View MSA
123750991 5271 Pentapetalae View MSA
122787491 5272 Eudicot View MSA
122047606 5273 Angiosperm View MSA
121351595 5274 Embryophyte View MSA
123426852 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain