Gene : Thecc1EG001307 T. cacao v1.1
Defline:  (1 of 3) PTHR13516//PTHR13516:SF9 - RIBONUCLEASE P SUBUNIT P25 // SUBFAMILY NOT NAMED Genomic Order:  1136
Name:  ? Thecc1EG001307 Secondary Identifier:  ? PAC:27437204
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG001307 0.5kb upstream 0.5kb upstream 4292 true scaffold_1: 6427744-6432035 Theobroma cacao
Thecc1EG001307 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 6427744-6428243 Theobroma cacao
Thecc1EG001307 0.5kb downstream 0.5kb downstream 4292 true scaffold_1: 6428244-6432535 Theobroma cacao
Thecc1EG001307 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 6432036-6432535 Theobroma cacao
Thecc1EG001307 1.0kb upstream 1.0kb upstream 4792 true scaffold_1: 6427244-6432035 Theobroma cacao
Thecc1EG001307 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 6427244-6428243 Theobroma cacao
Thecc1EG001307 1.0kb downstream 1.0kb downstream 4792 true scaffold_1: 6428244-6433035 Theobroma cacao
Thecc1EG001307 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 6432036-6433035 Theobroma cacao
Thecc1EG001307 2.0kb upstream 2.0kb upstream 5792 true scaffold_1: 6426244-6432035 Theobroma cacao
Thecc1EG001307 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 6426244-6428243 Theobroma cacao
Thecc1EG001307 2.0kb downstream 2.0kb downstream 5792 true scaffold_1: 6428244-6434035 Theobroma cacao
Thecc1EG001307 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 6432036-6434035 Theobroma cacao
Thecc1EG001307 5.0kb upstream 5.0kb upstream 8792 true scaffold_1: 6423244-6432035 Theobroma cacao
Thecc1EG001307 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 6423244-6428243 Theobroma cacao
Thecc1EG001307 5.0kb downstream 5.0kb downstream 8792 true scaffold_1: 6428244-6437035 Theobroma cacao
Thecc1EG001307 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 6432036-6437035 Theobroma cacao
Thecc1EG001307 10.0kb upstream 10.0kb upstream 13792 true scaffold_1: 6418244-6432035 Theobroma cacao
Thecc1EG001307 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 6418244-6428243 Theobroma cacao
Thecc1EG001307 10.0kb downstream 10.0kb downstream 13792 true scaffold_1: 6428244-6442035 Theobroma cacao
Thecc1EG001307 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 6432036-6442035 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824168 5264 Brassicales-Malvales View MSA
124349293 5266 SBM View MSA
124248843 5268 Malvidae View MSA
124072183 5270 Rosid View MSA
123752020 5271 Pentapetalae View MSA
122793375 5272 Eudicot View MSA
122050157 5273 Angiosperm View MSA
121346602 5274 Embryophyte View MSA
123428727 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain