Gene : Thecc1EG001313 T. cacao v1.1
Defline:  Fasciclin-like arabinogalactan protein 18 Genomic Order:  1141
Name:  ? Thecc1EG001313 Secondary Identifier:  ? PAC:27435275
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG001313 0.5kb upstream 0.5kb upstream 1604 true scaffold_1: 6464281-6465884 Theobroma cacao
Thecc1EG001313 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 6465385-6465884 Theobroma cacao
Thecc1EG001313 0.5kb downstream 0.5kb downstream 1604 true scaffold_1: 6463781-6465384 Theobroma cacao
Thecc1EG001313 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 6463781-6464280 Theobroma cacao
Thecc1EG001313 1.0kb upstream 1.0kb upstream 2104 true scaffold_1: 6464281-6466384 Theobroma cacao
Thecc1EG001313 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 6465385-6466384 Theobroma cacao
Thecc1EG001313 1.0kb downstream 1.0kb downstream 2104 true scaffold_1: 6463281-6465384 Theobroma cacao
Thecc1EG001313 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 6463281-6464280 Theobroma cacao
Thecc1EG001313 2.0kb upstream 2.0kb upstream 3104 true scaffold_1: 6464281-6467384 Theobroma cacao
Thecc1EG001313 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 6465385-6467384 Theobroma cacao
Thecc1EG001313 2.0kb downstream 2.0kb downstream 3104 true scaffold_1: 6462281-6465384 Theobroma cacao
Thecc1EG001313 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 6462281-6464280 Theobroma cacao
Thecc1EG001313 5.0kb upstream 5.0kb upstream 6104 true scaffold_1: 6464281-6470384 Theobroma cacao
Thecc1EG001313 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 6465385-6470384 Theobroma cacao
Thecc1EG001313 5.0kb downstream 5.0kb downstream 6104 true scaffold_1: 6459281-6465384 Theobroma cacao
Thecc1EG001313 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 6459281-6464280 Theobroma cacao
Thecc1EG001313 10.0kb upstream 10.0kb upstream 11104 true scaffold_1: 6464281-6475384 Theobroma cacao
Thecc1EG001313 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 6465385-6475384 Theobroma cacao
Thecc1EG001313 10.0kb downstream 10.0kb downstream 11104 true scaffold_1: 6454281-6465384 Theobroma cacao
Thecc1EG001313 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 6454281-6464280 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836003 5264 Brassicales-Malvales View MSA
124322122 5266 SBM View MSA
124247783 5268 Malvidae View MSA
124038918 5270 Rosid View MSA
123753187 5271 Pentapetalae View MSA
122794600 5272 Eudicot View MSA
122049688 5273 Angiosperm View MSA
121351509 5274 Embryophyte View MSA
123426561 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain