Gene : Thecc1EG001267 T. cacao v1.1
Defline:  (1 of 1) PTHR10072:SF48 - IRON-SULFUR ASSEMBLY PROTEIN ISCA, CHLOROPLASTIC Genomic Order:  1104
Name:  ? Thecc1EG001267 Secondary Identifier:  ? PAC:27437397
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG001267 0.5kb upstream 0.5kb upstream 4868 true scaffold_1: 6162633-6167500 Theobroma cacao
Thecc1EG001267 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 6162633-6163132 Theobroma cacao
Thecc1EG001267 0.5kb downstream 0.5kb downstream 4868 true scaffold_1: 6163133-6168000 Theobroma cacao
Thecc1EG001267 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 6167501-6168000 Theobroma cacao
Thecc1EG001267 1.0kb upstream 1.0kb upstream 5368 true scaffold_1: 6162133-6167500 Theobroma cacao
Thecc1EG001267 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 6162133-6163132 Theobroma cacao
Thecc1EG001267 1.0kb downstream 1.0kb downstream 5368 true scaffold_1: 6163133-6168500 Theobroma cacao
Thecc1EG001267 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 6167501-6168500 Theobroma cacao
Thecc1EG001267 2.0kb upstream 2.0kb upstream 6368 true scaffold_1: 6161133-6167500 Theobroma cacao
Thecc1EG001267 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 6161133-6163132 Theobroma cacao
Thecc1EG001267 2.0kb downstream 2.0kb downstream 6368 true scaffold_1: 6163133-6169500 Theobroma cacao
Thecc1EG001267 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 6167501-6169500 Theobroma cacao
Thecc1EG001267 5.0kb upstream 5.0kb upstream 9368 true scaffold_1: 6158133-6167500 Theobroma cacao
Thecc1EG001267 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 6158133-6163132 Theobroma cacao
Thecc1EG001267 5.0kb downstream 5.0kb downstream 9368 true scaffold_1: 6163133-6172500 Theobroma cacao
Thecc1EG001267 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 6167501-6172500 Theobroma cacao
Thecc1EG001267 10.0kb upstream 10.0kb upstream 14368 true scaffold_1: 6153133-6167500 Theobroma cacao
Thecc1EG001267 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 6153133-6163132 Theobroma cacao
Thecc1EG001267 10.0kb downstream 10.0kb downstream 14368 true scaffold_1: 6163133-6177500 Theobroma cacao
Thecc1EG001267 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 6167501-6177500 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838817 5264 Brassicales-Malvales View MSA
124350235 5266 SBM View MSA
124238318 5268 Malvidae View MSA
124065003 5270 Rosid View MSA
123740000 5271 Pentapetalae View MSA
122792600 5272 Eudicot View MSA
122046362 5273 Angiosperm View MSA
121346119 5274 Embryophyte View MSA
123427871 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain