Gene : Thecc1EG001241 T. cacao v1.1
Defline:  (1 of 1) PTHR33471:SF5 - EXPRESSED PROTEIN Genomic Order:  1082
Name:  ? Thecc1EG001241 Secondary Identifier:  ? PAC:27431513
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG001241 0.5kb upstream 0.5kb upstream 5077 true scaffold_1: 6014561-6019637 Theobroma cacao
Thecc1EG001241 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 6019138-6019637 Theobroma cacao
Thecc1EG001241 0.5kb downstream 0.5kb downstream 5077 true scaffold_1: 6014061-6019137 Theobroma cacao
Thecc1EG001241 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 6014061-6014560 Theobroma cacao
Thecc1EG001241 1.0kb upstream 1.0kb upstream 5577 true scaffold_1: 6014561-6020137 Theobroma cacao
Thecc1EG001241 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 6019138-6020137 Theobroma cacao
Thecc1EG001241 1.0kb downstream 1.0kb downstream 5577 true scaffold_1: 6013561-6019137 Theobroma cacao
Thecc1EG001241 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 6013561-6014560 Theobroma cacao
Thecc1EG001241 2.0kb upstream 2.0kb upstream 6577 true scaffold_1: 6014561-6021137 Theobroma cacao
Thecc1EG001241 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 6019138-6021137 Theobroma cacao
Thecc1EG001241 2.0kb downstream 2.0kb downstream 6577 true scaffold_1: 6012561-6019137 Theobroma cacao
Thecc1EG001241 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 6012561-6014560 Theobroma cacao
Thecc1EG001241 5.0kb upstream 5.0kb upstream 9577 true scaffold_1: 6014561-6024137 Theobroma cacao
Thecc1EG001241 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 6019138-6024137 Theobroma cacao
Thecc1EG001241 5.0kb downstream 5.0kb downstream 9577 true scaffold_1: 6009561-6019137 Theobroma cacao
Thecc1EG001241 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 6009561-6014560 Theobroma cacao
Thecc1EG001241 10.0kb upstream 10.0kb upstream 14577 true scaffold_1: 6014561-6029137 Theobroma cacao
Thecc1EG001241 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 6019138-6029137 Theobroma cacao
Thecc1EG001241 10.0kb downstream 10.0kb downstream 14577 true scaffold_1: 6004561-6019137 Theobroma cacao
Thecc1EG001241 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 6004561-6014560 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026537 5273 Angiosperm View MSA
123828150 5264 Brassicales-Malvales View MSA
124337856 5266 SBM View MSA
124241290 5268 Malvidae View MSA
124062959 5270 Rosid View MSA
123740004 5271 Pentapetalae View MSA
122793582 5272 Eudicot View MSA
121345854 5274 Embryophyte View MSA
123426858 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain