Gene : Thecc1EG001248 T. cacao v1.1
Defline:  (1 of 191) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  1087
Name:  ? Thecc1EG001248 Secondary Identifier:  ? PAC:27436126
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG001248 0.5kb upstream 0.5kb upstream 21358 true scaffold_1: 6044253-6065610 Theobroma cacao
Thecc1EG001248 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 6044253-6044752 Theobroma cacao
Thecc1EG001248 0.5kb downstream 0.5kb downstream 21358 true scaffold_1: 6044753-6066110 Theobroma cacao
Thecc1EG001248 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 6065611-6066110 Theobroma cacao
Thecc1EG001248 1.0kb upstream 1.0kb upstream 21858 true scaffold_1: 6043753-6065610 Theobroma cacao
Thecc1EG001248 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 6043753-6044752 Theobroma cacao
Thecc1EG001248 1.0kb downstream 1.0kb downstream 21858 true scaffold_1: 6044753-6066610 Theobroma cacao
Thecc1EG001248 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 6065611-6066610 Theobroma cacao
Thecc1EG001248 2.0kb upstream 2.0kb upstream 22858 true scaffold_1: 6042753-6065610 Theobroma cacao
Thecc1EG001248 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 6042753-6044752 Theobroma cacao
Thecc1EG001248 2.0kb downstream 2.0kb downstream 22858 true scaffold_1: 6044753-6067610 Theobroma cacao
Thecc1EG001248 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 6065611-6067610 Theobroma cacao
Thecc1EG001248 5.0kb upstream 5.0kb upstream 25858 true scaffold_1: 6039753-6065610 Theobroma cacao
Thecc1EG001248 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 6039753-6044752 Theobroma cacao
Thecc1EG001248 5.0kb downstream 5.0kb downstream 25858 true scaffold_1: 6044753-6070610 Theobroma cacao
Thecc1EG001248 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 6065611-6070610 Theobroma cacao
Thecc1EG001248 10.0kb upstream 10.0kb upstream 30858 true scaffold_1: 6034753-6065610 Theobroma cacao
Thecc1EG001248 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 6034753-6044752 Theobroma cacao
Thecc1EG001248 10.0kb downstream 10.0kb downstream 30858 true scaffold_1: 6044753-6075610 Theobroma cacao
Thecc1EG001248 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 6065611-6075610 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828770 5264 Brassicales-Malvales View MSA
124338071 5266 SBM View MSA
124246934 5268 Malvidae View MSA
124061137 5270 Rosid View MSA
123742346 5271 Pentapetalae View MSA
122794962 5272 Eudicot View MSA
122044957 5273 Angiosperm View MSA
121352585 5274 Embryophyte View MSA
123382887 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain