Gene : Thecc1EG001516 T. cacao v1.1
Defline:  (1 of 1) PTHR10625//PTHR10625:SF104 - HISTONE DEACETYLASE // HISTONE DEACETYLASE 6 Genomic Order:  1300
Name:  ? Thecc1EG001516 Secondary Identifier:  ? PAC:27434177
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG001516 0.5kb upstream 0.5kb upstream 9767 true scaffold_1: 7605934-7615700 Theobroma cacao
Thecc1EG001516 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 7615201-7615700 Theobroma cacao
Thecc1EG001516 0.5kb downstream 0.5kb downstream 9767 true scaffold_1: 7605434-7615200 Theobroma cacao
Thecc1EG001516 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 7605434-7605933 Theobroma cacao
Thecc1EG001516 1.0kb upstream 1.0kb upstream 10267 true scaffold_1: 7605934-7616200 Theobroma cacao
Thecc1EG001516 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 7615201-7616200 Theobroma cacao
Thecc1EG001516 1.0kb downstream 1.0kb downstream 10267 true scaffold_1: 7604934-7615200 Theobroma cacao
Thecc1EG001516 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 7604934-7605933 Theobroma cacao
Thecc1EG001516 2.0kb upstream 2.0kb upstream 11267 true scaffold_1: 7605934-7617200 Theobroma cacao
Thecc1EG001516 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 7615201-7617200 Theobroma cacao
Thecc1EG001516 2.0kb downstream 2.0kb downstream 11267 true scaffold_1: 7603934-7615200 Theobroma cacao
Thecc1EG001516 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 7603934-7605933 Theobroma cacao
Thecc1EG001516 5.0kb upstream 5.0kb upstream 14267 true scaffold_1: 7605934-7620200 Theobroma cacao
Thecc1EG001516 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 7615201-7620200 Theobroma cacao
Thecc1EG001516 5.0kb downstream 5.0kb downstream 14267 true scaffold_1: 7600934-7615200 Theobroma cacao
Thecc1EG001516 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 7600934-7605933 Theobroma cacao
Thecc1EG001516 10.0kb upstream 10.0kb upstream 19267 true scaffold_1: 7605934-7625200 Theobroma cacao
Thecc1EG001516 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 7615201-7625200 Theobroma cacao
Thecc1EG001516 10.0kb downstream 10.0kb downstream 19267 true scaffold_1: 7595934-7615200 Theobroma cacao
Thecc1EG001516 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 7595934-7605933 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123815731 5264 Brassicales-Malvales Singleton cluster - no MSA
124312153 5266 SBM Singleton cluster - no MSA
124255262 5268 Malvidae View MSA
123953129 5270 Rosid View MSA
123530637 5271 Pentapetalae View MSA
122565591 5272 Eudicot View MSA
122051091 5273 Angiosperm View MSA
121349302 5274 Embryophyte View MSA
123428156 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain