Gene : Thecc1EG001498 T. cacao v1.1
Defline:  (1 of 1) K02701 - photosystem I subunit PsaN (psaN) Genomic Order:  1283
Name:  ? Thecc1EG001498 Secondary Identifier:  ? PAC:27435861
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG001498 0.5kb upstream 0.5kb upstream 2233 true scaffold_1: 7508234-7510466 Theobroma cacao
Thecc1EG001498 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 7508234-7508733 Theobroma cacao
Thecc1EG001498 0.5kb downstream 0.5kb downstream 2233 true scaffold_1: 7508734-7510966 Theobroma cacao
Thecc1EG001498 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 7510467-7510966 Theobroma cacao
Thecc1EG001498 1.0kb upstream 1.0kb upstream 2733 true scaffold_1: 7507734-7510466 Theobroma cacao
Thecc1EG001498 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 7507734-7508733 Theobroma cacao
Thecc1EG001498 1.0kb downstream 1.0kb downstream 2733 true scaffold_1: 7508734-7511466 Theobroma cacao
Thecc1EG001498 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 7510467-7511466 Theobroma cacao
Thecc1EG001498 2.0kb upstream 2.0kb upstream 3733 true scaffold_1: 7506734-7510466 Theobroma cacao
Thecc1EG001498 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 7506734-7508733 Theobroma cacao
Thecc1EG001498 2.0kb downstream 2.0kb downstream 3733 true scaffold_1: 7508734-7512466 Theobroma cacao
Thecc1EG001498 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 7510467-7512466 Theobroma cacao
Thecc1EG001498 5.0kb upstream 5.0kb upstream 6733 true scaffold_1: 7503734-7510466 Theobroma cacao
Thecc1EG001498 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 7503734-7508733 Theobroma cacao
Thecc1EG001498 5.0kb downstream 5.0kb downstream 6733 true scaffold_1: 7508734-7515466 Theobroma cacao
Thecc1EG001498 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 7510467-7515466 Theobroma cacao
Thecc1EG001498 10.0kb upstream 10.0kb upstream 11733 true scaffold_1: 7498734-7510466 Theobroma cacao
Thecc1EG001498 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 7498734-7508733 Theobroma cacao
Thecc1EG001498 10.0kb downstream 10.0kb downstream 11733 true scaffold_1: 7508734-7520466 Theobroma cacao
Thecc1EG001498 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 7510467-7520466 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830230 5264 Brassicales-Malvales View MSA
124345790 5266 SBM View MSA
124247840 5268 Malvidae View MSA
124061914 5270 Rosid View MSA
123739503 5271 Pentapetalae View MSA
122786700 5272 Eudicot View MSA
122046387 5273 Angiosperm View MSA
121346900 5274 Embryophyte View MSA
123425334 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain