Gene : Thecc1EG001455 T. cacao v1.1
Defline:  (1 of 1) PTHR23076//PTHR23076:SF49 - METALLOPROTEASE M41 FTSH // AAA-TYPE ATPASE FAMILY PROTEIN Genomic Order:  1249
Name:  ? Thecc1EG001455 Secondary Identifier:  ? PAC:27436386
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG001455 0.5kb upstream 0.5kb upstream 16573 true scaffold_1: 7235557-7252129 Theobroma cacao
Thecc1EG001455 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 7251630-7252129 Theobroma cacao
Thecc1EG001455 0.5kb downstream 0.5kb downstream 16573 true scaffold_1: 7235057-7251629 Theobroma cacao
Thecc1EG001455 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 7235057-7235556 Theobroma cacao
Thecc1EG001455 1.0kb upstream 1.0kb upstream 17073 true scaffold_1: 7235557-7252629 Theobroma cacao
Thecc1EG001455 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 7251630-7252629 Theobroma cacao
Thecc1EG001455 1.0kb downstream 1.0kb downstream 17073 true scaffold_1: 7234557-7251629 Theobroma cacao
Thecc1EG001455 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 7234557-7235556 Theobroma cacao
Thecc1EG001455 2.0kb upstream 2.0kb upstream 18073 true scaffold_1: 7235557-7253629 Theobroma cacao
Thecc1EG001455 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 7251630-7253629 Theobroma cacao
Thecc1EG001455 2.0kb downstream 2.0kb downstream 18073 true scaffold_1: 7233557-7251629 Theobroma cacao
Thecc1EG001455 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 7233557-7235556 Theobroma cacao
Thecc1EG001455 5.0kb upstream 5.0kb upstream 21073 true scaffold_1: 7235557-7256629 Theobroma cacao
Thecc1EG001455 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 7251630-7256629 Theobroma cacao
Thecc1EG001455 5.0kb downstream 5.0kb downstream 21073 true scaffold_1: 7230557-7251629 Theobroma cacao
Thecc1EG001455 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 7230557-7235556 Theobroma cacao
Thecc1EG001455 10.0kb upstream 10.0kb upstream 26073 true scaffold_1: 7235557-7261629 Theobroma cacao
Thecc1EG001455 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 7251630-7261629 Theobroma cacao
Thecc1EG001455 10.0kb downstream 10.0kb downstream 26073 true scaffold_1: 7225557-7251629 Theobroma cacao
Thecc1EG001455 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 7225557-7235556 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829147 5264 Brassicales-Malvales View MSA
124340816 5266 SBM View MSA
124240643 5268 Malvidae View MSA
124066007 5270 Rosid View MSA
123738416 5271 Pentapetalae View MSA
122790727 5272 Eudicot View MSA
122043853 5273 Angiosperm View MSA
121345104 5274 Embryophyte View MSA
123380156 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain