Gene : Thecc1EG001631 T. cacao v1.1

Defline:  (1 of 8) PF05003//PF11961 - Protein of unknown function (DUF668) (DUF668) // Domain of unknown function (DUF3475) (DUF3475) Genomic Order:  1397
Name:  ? Thecc1EG001631 Secondary Identifier:  ? PAC:27431799

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG001631 0.5kb upstream 0.5kb upstream 9809 true scaffold_1: 8373150-8382958 Theobroma cacao
Thecc1EG001631 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 8373150-8373649 Theobroma cacao
Thecc1EG001631 0.5kb downstream 0.5kb downstream 9809 true scaffold_1: 8373650-8383458 Theobroma cacao
Thecc1EG001631 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 8382959-8383458 Theobroma cacao
Thecc1EG001631 1.0kb upstream 1.0kb upstream 10309 true scaffold_1: 8372650-8382958 Theobroma cacao
Thecc1EG001631 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 8372650-8373649 Theobroma cacao
Thecc1EG001631 1.0kb downstream 1.0kb downstream 10309 true scaffold_1: 8373650-8383958 Theobroma cacao
Thecc1EG001631 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 8382959-8383958 Theobroma cacao
Thecc1EG001631 2.0kb upstream 2.0kb upstream 11309 true scaffold_1: 8371650-8382958 Theobroma cacao
Thecc1EG001631 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 8371650-8373649 Theobroma cacao
Thecc1EG001631 2.0kb downstream 2.0kb downstream 11309 true scaffold_1: 8373650-8384958 Theobroma cacao
Thecc1EG001631 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 8382959-8384958 Theobroma cacao
Thecc1EG001631 5.0kb upstream 5.0kb upstream 14309 true scaffold_1: 8368650-8382958 Theobroma cacao
Thecc1EG001631 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 8368650-8373649 Theobroma cacao
Thecc1EG001631 5.0kb downstream 5.0kb downstream 14309 true scaffold_1: 8373650-8387958 Theobroma cacao
Thecc1EG001631 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 8382959-8387958 Theobroma cacao
Thecc1EG001631 10.0kb upstream 10.0kb upstream 19309 true scaffold_1: 8363650-8382958 Theobroma cacao
Thecc1EG001631 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 8363650-8373649 Theobroma cacao
Thecc1EG001631 10.0kb downstream 10.0kb downstream 19309 true scaffold_1: 8373650-8392958 Theobroma cacao
Thecc1EG001631 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 8382959-8392958 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121691317 5273 Angiosperm View MSA
123837395 5264 Brassicales-Malvales View MSA
124348001 5266 SBM View MSA
124180961 5268 Malvidae View MSA
124050917 5270 Rosid View MSA
123647177 5271 Pentapetalae View MSA
122681176 5272 Eudicot View MSA
120963176 5274 Embryophyte View MSA
123003532 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain