Gene : Thecc1EG001638 T. cacao v1.1
Defline:  (1 of 3) PTHR14445:SF39 - SWIB/MDM2, PLUS-3 AND GYF DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  1401
Name:  ? Thecc1EG001638 Secondary Identifier:  ? PAC:27433397
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG001638 0.5kb upstream 0.5kb upstream 18755 true scaffold_1: 8439009-8457763 Theobroma cacao
Thecc1EG001638 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 8457264-8457763 Theobroma cacao
Thecc1EG001638 0.5kb downstream 0.5kb downstream 18755 true scaffold_1: 8438509-8457263 Theobroma cacao
Thecc1EG001638 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 8438509-8439008 Theobroma cacao
Thecc1EG001638 1.0kb upstream 1.0kb upstream 19255 true scaffold_1: 8439009-8458263 Theobroma cacao
Thecc1EG001638 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 8457264-8458263 Theobroma cacao
Thecc1EG001638 1.0kb downstream 1.0kb downstream 19255 true scaffold_1: 8438009-8457263 Theobroma cacao
Thecc1EG001638 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 8438009-8439008 Theobroma cacao
Thecc1EG001638 2.0kb upstream 2.0kb upstream 20255 true scaffold_1: 8439009-8459263 Theobroma cacao
Thecc1EG001638 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 8457264-8459263 Theobroma cacao
Thecc1EG001638 2.0kb downstream 2.0kb downstream 20255 true scaffold_1: 8437009-8457263 Theobroma cacao
Thecc1EG001638 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 8437009-8439008 Theobroma cacao
Thecc1EG001638 5.0kb upstream 5.0kb upstream 23255 true scaffold_1: 8439009-8462263 Theobroma cacao
Thecc1EG001638 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 8457264-8462263 Theobroma cacao
Thecc1EG001638 5.0kb downstream 5.0kb downstream 23255 true scaffold_1: 8434009-8457263 Theobroma cacao
Thecc1EG001638 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 8434009-8439008 Theobroma cacao
Thecc1EG001638 10.0kb upstream 10.0kb upstream 28255 true scaffold_1: 8439009-8467263 Theobroma cacao
Thecc1EG001638 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 8457264-8467263 Theobroma cacao
Thecc1EG001638 10.0kb downstream 10.0kb downstream 28255 true scaffold_1: 8429009-8457263 Theobroma cacao
Thecc1EG001638 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 8429009-8439008 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833344 5264 Brassicales-Malvales View MSA
124321865 5266 SBM View MSA
124238223 5268 Malvidae View MSA
124074720 5270 Rosid View MSA
123753023 5271 Pentapetalae View MSA
122797063 5272 Eudicot View MSA
122044287 5273 Angiosperm View MSA
121348598 5274 Embryophyte View MSA
123380932 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain