Gene : Thecc1EG001611 T. cacao v1.1
Defline:  (1 of 1) PTHR31580:SF5 - FILAMENT-LIKE PLANT PROTEIN 3 Genomic Order:  1378
Name:  ? Thecc1EG001611 Secondary Identifier:  ? PAC:27434108
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG001611 0.5kb upstream 0.5kb upstream 6825 true scaffold_1: 8217013-8223837 Theobroma cacao
Thecc1EG001611 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 8223338-8223837 Theobroma cacao
Thecc1EG001611 0.5kb downstream 0.5kb downstream 6825 true scaffold_1: 8216513-8223337 Theobroma cacao
Thecc1EG001611 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 8216513-8217012 Theobroma cacao
Thecc1EG001611 1.0kb upstream 1.0kb upstream 7325 true scaffold_1: 8217013-8224337 Theobroma cacao
Thecc1EG001611 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 8223338-8224337 Theobroma cacao
Thecc1EG001611 1.0kb downstream 1.0kb downstream 7325 true scaffold_1: 8216013-8223337 Theobroma cacao
Thecc1EG001611 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 8216013-8217012 Theobroma cacao
Thecc1EG001611 2.0kb upstream 2.0kb upstream 8325 true scaffold_1: 8217013-8225337 Theobroma cacao
Thecc1EG001611 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 8223338-8225337 Theobroma cacao
Thecc1EG001611 2.0kb downstream 2.0kb downstream 8325 true scaffold_1: 8215013-8223337 Theobroma cacao
Thecc1EG001611 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 8215013-8217012 Theobroma cacao
Thecc1EG001611 5.0kb upstream 5.0kb upstream 11325 true scaffold_1: 8217013-8228337 Theobroma cacao
Thecc1EG001611 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 8223338-8228337 Theobroma cacao
Thecc1EG001611 5.0kb downstream 5.0kb downstream 11325 true scaffold_1: 8212013-8223337 Theobroma cacao
Thecc1EG001611 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 8212013-8217012 Theobroma cacao
Thecc1EG001611 10.0kb upstream 10.0kb upstream 16325 true scaffold_1: 8217013-8233337 Theobroma cacao
Thecc1EG001611 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 8223338-8233337 Theobroma cacao
Thecc1EG001611 10.0kb downstream 10.0kb downstream 16325 true scaffold_1: 8207013-8223337 Theobroma cacao
Thecc1EG001611 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 8207013-8217012 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839144 5264 Brassicales-Malvales View MSA
124348232 5266 SBM View MSA
124250015 5268 Malvidae View MSA
124071762 5270 Rosid View MSA
123742978 5271 Pentapetalae View MSA
122791145 5272 Eudicot View MSA
122043487 5273 Angiosperm View MSA
121310135 5274 Embryophyte View MSA
123347707 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain