Gene : Thecc1EG001598 T. cacao v1.1
Defline:  (1 of 2) PTHR11699:SF171 - ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER I1, CHLOROPLASTIC Genomic Order:  1366
Name:  ? Thecc1EG001598 Secondary Identifier:  ? PAC:27435593
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-2724 Theobroma cacao pathologic  
Tcacao PWY-6054 Theobroma cacao pathologic  
Tcacao PWY66-21 Theobroma cacao pathologic  
Tcacao PWY66-389 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG001598 0.5kb upstream 0.5kb upstream 8778 true scaffold_1: 8131566-8140343 Theobroma cacao
Thecc1EG001598 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 8139844-8140343 Theobroma cacao
Thecc1EG001598 0.5kb downstream 0.5kb downstream 8778 true scaffold_1: 8131066-8139843 Theobroma cacao
Thecc1EG001598 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 8131066-8131565 Theobroma cacao
Thecc1EG001598 1.0kb upstream 1.0kb upstream 9278 true scaffold_1: 8131566-8140843 Theobroma cacao
Thecc1EG001598 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 8139844-8140843 Theobroma cacao
Thecc1EG001598 1.0kb downstream 1.0kb downstream 9278 true scaffold_1: 8130566-8139843 Theobroma cacao
Thecc1EG001598 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 8130566-8131565 Theobroma cacao
Thecc1EG001598 2.0kb upstream 2.0kb upstream 10278 true scaffold_1: 8131566-8141843 Theobroma cacao
Thecc1EG001598 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 8139844-8141843 Theobroma cacao
Thecc1EG001598 2.0kb downstream 2.0kb downstream 10278 true scaffold_1: 8129566-8139843 Theobroma cacao
Thecc1EG001598 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 8129566-8131565 Theobroma cacao
Thecc1EG001598 5.0kb upstream 5.0kb upstream 13278 true scaffold_1: 8131566-8144843 Theobroma cacao
Thecc1EG001598 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 8139844-8144843 Theobroma cacao
Thecc1EG001598 5.0kb downstream 5.0kb downstream 13278 true scaffold_1: 8126566-8139843 Theobroma cacao
Thecc1EG001598 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 8126566-8131565 Theobroma cacao
Thecc1EG001598 10.0kb upstream 10.0kb upstream 18278 true scaffold_1: 8131566-8149843 Theobroma cacao
Thecc1EG001598 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 8139844-8149843 Theobroma cacao
Thecc1EG001598 10.0kb downstream 10.0kb downstream 18278 true scaffold_1: 8121566-8139843 Theobroma cacao
Thecc1EG001598 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 8121566-8131565 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831244 5264 Brassicales-Malvales View MSA
124337798 5266 SBM View MSA
124245156 5268 Malvidae View MSA
124071959 5270 Rosid View MSA
123741483 5271 Pentapetalae View MSA
122790699 5272 Eudicot View MSA
122047593 5273 Angiosperm View MSA
121349887 5274 Embryophyte View MSA
123425420 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain