Gene : Thecc1EG001580 T. cacao v1.1
Defline:  (1 of 1) PTHR22950//PTHR22950:SF295 - AMINO ACID TRANSPORTER // AMINO ACID PERMEASE 2 Genomic Order:  1349
Name:  ? Thecc1EG001580 Secondary Identifier:  ? PAC:27435304
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG001580 0.5kb upstream 0.5kb upstream 4503 true scaffold_1: 7993853-7998355 Theobroma cacao
Thecc1EG001580 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 7997856-7998355 Theobroma cacao
Thecc1EG001580 0.5kb downstream 0.5kb downstream 4503 true scaffold_1: 7993353-7997855 Theobroma cacao
Thecc1EG001580 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 7993353-7993852 Theobroma cacao
Thecc1EG001580 1.0kb upstream 1.0kb upstream 5003 true scaffold_1: 7993853-7998855 Theobroma cacao
Thecc1EG001580 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 7997856-7998855 Theobroma cacao
Thecc1EG001580 1.0kb downstream 1.0kb downstream 5003 true scaffold_1: 7992853-7997855 Theobroma cacao
Thecc1EG001580 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 7992853-7993852 Theobroma cacao
Thecc1EG001580 2.0kb upstream 2.0kb upstream 6003 true scaffold_1: 7993853-7999855 Theobroma cacao
Thecc1EG001580 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 7997856-7999855 Theobroma cacao
Thecc1EG001580 2.0kb downstream 2.0kb downstream 6003 true scaffold_1: 7991853-7997855 Theobroma cacao
Thecc1EG001580 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 7991853-7993852 Theobroma cacao
Thecc1EG001580 5.0kb upstream 5.0kb upstream 9003 true scaffold_1: 7993853-8002855 Theobroma cacao
Thecc1EG001580 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 7997856-8002855 Theobroma cacao
Thecc1EG001580 5.0kb downstream 5.0kb downstream 9003 true scaffold_1: 7988853-7997855 Theobroma cacao
Thecc1EG001580 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 7988853-7993852 Theobroma cacao
Thecc1EG001580 10.0kb upstream 10.0kb upstream 14003 true scaffold_1: 7993853-8007855 Theobroma cacao
Thecc1EG001580 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 7997856-8007855 Theobroma cacao
Thecc1EG001580 10.0kb downstream 10.0kb downstream 14003 true scaffold_1: 7983853-7997855 Theobroma cacao
Thecc1EG001580 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 7983853-7993852 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827615 5264 Brassicales-Malvales View MSA
124342972 5266 SBM View MSA
124237143 5268 Malvidae View MSA
124067391 5270 Rosid View MSA
123747196 5271 Pentapetalae View MSA
122795711 5272 Eudicot View MSA
122048359 5273 Angiosperm View MSA
121351118 5274 Embryophyte View MSA
123426213 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain