Gene : Thecc1EG001553 T. cacao v1.1
Defline:  (1 of 1) PTHR11390//PTHR11390:SF21 - PROKARYOTIC DNA TOPOISOMERASE // DNA TOPOISOMERASE 3-ALPHA Genomic Order:  1331
Name:  ? Thecc1EG001553 Secondary Identifier:  ? PAC:27433128
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG001553 0.5kb upstream 0.5kb upstream 31580 true scaffold_1: 7857636-7889215 Theobroma cacao
Thecc1EG001553 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 7857636-7858135 Theobroma cacao
Thecc1EG001553 0.5kb downstream 0.5kb downstream 31580 true scaffold_1: 7858136-7889715 Theobroma cacao
Thecc1EG001553 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 7889216-7889715 Theobroma cacao
Thecc1EG001553 1.0kb upstream 1.0kb upstream 32080 true scaffold_1: 7857136-7889215 Theobroma cacao
Thecc1EG001553 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 7857136-7858135 Theobroma cacao
Thecc1EG001553 1.0kb downstream 1.0kb downstream 32080 true scaffold_1: 7858136-7890215 Theobroma cacao
Thecc1EG001553 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 7889216-7890215 Theobroma cacao
Thecc1EG001553 2.0kb upstream 2.0kb upstream 33080 true scaffold_1: 7856136-7889215 Theobroma cacao
Thecc1EG001553 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 7856136-7858135 Theobroma cacao
Thecc1EG001553 2.0kb downstream 2.0kb downstream 33080 true scaffold_1: 7858136-7891215 Theobroma cacao
Thecc1EG001553 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 7889216-7891215 Theobroma cacao
Thecc1EG001553 5.0kb upstream 5.0kb upstream 36080 true scaffold_1: 7853136-7889215 Theobroma cacao
Thecc1EG001553 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 7853136-7858135 Theobroma cacao
Thecc1EG001553 5.0kb downstream 5.0kb downstream 36080 true scaffold_1: 7858136-7894215 Theobroma cacao
Thecc1EG001553 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 7889216-7894215 Theobroma cacao
Thecc1EG001553 10.0kb upstream 10.0kb upstream 41080 true scaffold_1: 7848136-7889215 Theobroma cacao
Thecc1EG001553 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 7848136-7858135 Theobroma cacao
Thecc1EG001553 10.0kb downstream 10.0kb downstream 41080 true scaffold_1: 7858136-7899215 Theobroma cacao
Thecc1EG001553 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 7889216-7899215 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041072 5273 Angiosperm View MSA
123829819 5264 Brassicales-Malvales View MSA
124340839 5266 SBM View MSA
124239103 5268 Malvidae View MSA
124073148 5270 Rosid View MSA
123740785 5271 Pentapetalae View MSA
122785761 5272 Eudicot View MSA
121346575 5274 Embryophyte View MSA
123425013 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain