Gene : Thecc1EG001550 T. cacao v1.1
Defline:  (1 of 1) K12195 - charged multivesicular body protein 6 (CHMP6, VPS20) Genomic Order:  1328
Name:  ? Thecc1EG001550 Secondary Identifier:  ? PAC:27435079
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG001550 0.5kb upstream 0.5kb upstream 6280 true scaffold_1: 7840321-7846600 Theobroma cacao
Thecc1EG001550 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 7840321-7840820 Theobroma cacao
Thecc1EG001550 0.5kb downstream 0.5kb downstream 6280 true scaffold_1: 7840821-7847100 Theobroma cacao
Thecc1EG001550 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 7846601-7847100 Theobroma cacao
Thecc1EG001550 1.0kb upstream 1.0kb upstream 6780 true scaffold_1: 7839821-7846600 Theobroma cacao
Thecc1EG001550 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 7839821-7840820 Theobroma cacao
Thecc1EG001550 1.0kb downstream 1.0kb downstream 6780 true scaffold_1: 7840821-7847600 Theobroma cacao
Thecc1EG001550 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 7846601-7847600 Theobroma cacao
Thecc1EG001550 2.0kb upstream 2.0kb upstream 7780 true scaffold_1: 7838821-7846600 Theobroma cacao
Thecc1EG001550 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 7838821-7840820 Theobroma cacao
Thecc1EG001550 2.0kb downstream 2.0kb downstream 7780 true scaffold_1: 7840821-7848600 Theobroma cacao
Thecc1EG001550 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 7846601-7848600 Theobroma cacao
Thecc1EG001550 5.0kb upstream 5.0kb upstream 10780 true scaffold_1: 7835821-7846600 Theobroma cacao
Thecc1EG001550 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 7835821-7840820 Theobroma cacao
Thecc1EG001550 5.0kb downstream 5.0kb downstream 10780 true scaffold_1: 7840821-7851600 Theobroma cacao
Thecc1EG001550 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 7846601-7851600 Theobroma cacao
Thecc1EG001550 10.0kb upstream 10.0kb upstream 15780 true scaffold_1: 7830821-7846600 Theobroma cacao
Thecc1EG001550 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 7830821-7840820 Theobroma cacao
Thecc1EG001550 10.0kb downstream 10.0kb downstream 15780 true scaffold_1: 7840821-7856600 Theobroma cacao
Thecc1EG001550 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 7846601-7856600 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835235 5264 Brassicales-Malvales View MSA
124337167 5266 SBM View MSA
124237441 5268 Malvidae View MSA
124061803 5270 Rosid View MSA
123741139 5271 Pentapetalae View MSA
122796799 5272 Eudicot View MSA
122043125 5273 Angiosperm View MSA
121349801 5274 Embryophyte View MSA
123425274 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain