Gene : Thecc1EG001690 T. cacao v1.1
Defline:  (1 of 2) PTHR12565//PTHR12565:SF82 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1446
Name:  ? Thecc1EG001690 Secondary Identifier:  ? PAC:27434652
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG001690 0.5kb upstream 0.5kb upstream 5063 true scaffold_1: 8759295-8764357 Theobroma cacao
Thecc1EG001690 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 8763858-8764357 Theobroma cacao
Thecc1EG001690 0.5kb downstream 0.5kb downstream 5063 true scaffold_1: 8758795-8763857 Theobroma cacao
Thecc1EG001690 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 8758795-8759294 Theobroma cacao
Thecc1EG001690 1.0kb upstream 1.0kb upstream 5563 true scaffold_1: 8759295-8764857 Theobroma cacao
Thecc1EG001690 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 8763858-8764857 Theobroma cacao
Thecc1EG001690 1.0kb downstream 1.0kb downstream 5563 true scaffold_1: 8758295-8763857 Theobroma cacao
Thecc1EG001690 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 8758295-8759294 Theobroma cacao
Thecc1EG001690 2.0kb upstream 2.0kb upstream 6563 true scaffold_1: 8759295-8765857 Theobroma cacao
Thecc1EG001690 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 8763858-8765857 Theobroma cacao
Thecc1EG001690 2.0kb downstream 2.0kb downstream 6563 true scaffold_1: 8757295-8763857 Theobroma cacao
Thecc1EG001690 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 8757295-8759294 Theobroma cacao
Thecc1EG001690 5.0kb upstream 5.0kb upstream 9563 true scaffold_1: 8759295-8768857 Theobroma cacao
Thecc1EG001690 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 8763858-8768857 Theobroma cacao
Thecc1EG001690 5.0kb downstream 5.0kb downstream 9563 true scaffold_1: 8754295-8763857 Theobroma cacao
Thecc1EG001690 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 8754295-8759294 Theobroma cacao
Thecc1EG001690 10.0kb upstream 10.0kb upstream 14563 true scaffold_1: 8759295-8773857 Theobroma cacao
Thecc1EG001690 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 8763858-8773857 Theobroma cacao
Thecc1EG001690 10.0kb downstream 10.0kb downstream 14563 true scaffold_1: 8749295-8763857 Theobroma cacao
Thecc1EG001690 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 8749295-8759294 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123815660 5264 Brassicales-Malvales Singleton cluster - no MSA
124349079 5266 SBM View MSA
124249042 5268 Malvidae View MSA
124070822 5270 Rosid View MSA
123748515 5271 Pentapetalae View MSA
122793981 5272 Eudicot View MSA
122048947 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain