Gene : Thecc1EG001656 T. cacao v1.1
Defline:  (1 of 1) PF04827//PF13359 - Plant transposon protein (Plant_tran) // DDE superfamily endonuclease (DDE_Tnp_4) Genomic Order:  1417
Name:  ? Thecc1EG001656 Secondary Identifier:  ? PAC:27433425
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG001656 0.5kb upstream 0.5kb upstream 4173 true scaffold_1: 8577327-8581499 Theobroma cacao
Thecc1EG001656 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 8577327-8577826 Theobroma cacao
Thecc1EG001656 0.5kb downstream 0.5kb downstream 4173 true scaffold_1: 8577827-8581999 Theobroma cacao
Thecc1EG001656 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 8581500-8581999 Theobroma cacao
Thecc1EG001656 1.0kb upstream 1.0kb upstream 4673 true scaffold_1: 8576827-8581499 Theobroma cacao
Thecc1EG001656 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 8576827-8577826 Theobroma cacao
Thecc1EG001656 1.0kb downstream 1.0kb downstream 4673 true scaffold_1: 8577827-8582499 Theobroma cacao
Thecc1EG001656 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 8581500-8582499 Theobroma cacao
Thecc1EG001656 2.0kb upstream 2.0kb upstream 5673 true scaffold_1: 8575827-8581499 Theobroma cacao
Thecc1EG001656 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 8575827-8577826 Theobroma cacao
Thecc1EG001656 2.0kb downstream 2.0kb downstream 5673 true scaffold_1: 8577827-8583499 Theobroma cacao
Thecc1EG001656 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 8581500-8583499 Theobroma cacao
Thecc1EG001656 5.0kb upstream 5.0kb upstream 8673 true scaffold_1: 8572827-8581499 Theobroma cacao
Thecc1EG001656 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 8572827-8577826 Theobroma cacao
Thecc1EG001656 5.0kb downstream 5.0kb downstream 8673 true scaffold_1: 8577827-8586499 Theobroma cacao
Thecc1EG001656 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 8581500-8586499 Theobroma cacao
Thecc1EG001656 10.0kb upstream 10.0kb upstream 13673 true scaffold_1: 8567827-8581499 Theobroma cacao
Thecc1EG001656 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 8567827-8577826 Theobroma cacao
Thecc1EG001656 10.0kb downstream 10.0kb downstream 13673 true scaffold_1: 8577827-8591499 Theobroma cacao
Thecc1EG001656 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 8581500-8591499 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836848 5264 Brassicales-Malvales View MSA
124322215 5266 SBM View MSA
124251220 5268 Malvidae View MSA
124066103 5270 Rosid View MSA
123753432 5271 Pentapetalae View MSA
122797499 5272 Eudicot View MSA
122051638 5273 Angiosperm View MSA
121312593 5274 Embryophyte View MSA
123349751 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain