Gene : Thecc1EG001646 T. cacao v1.1
Defline:  (1 of 3) KOG2401 - Predicted MutS-related protein involved in mismatch repair Genomic Order:  1408
Name:  ? Thecc1EG001646 Secondary Identifier:  ? PAC:27436361
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG001646 0.5kb upstream 0.5kb upstream 4809 true scaffold_1: 8510667-8515475 Theobroma cacao
Thecc1EG001646 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 8514976-8515475 Theobroma cacao
Thecc1EG001646 0.5kb downstream 0.5kb downstream 4809 true scaffold_1: 8510167-8514975 Theobroma cacao
Thecc1EG001646 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 8510167-8510666 Theobroma cacao
Thecc1EG001646 1.0kb upstream 1.0kb upstream 5309 true scaffold_1: 8510667-8515975 Theobroma cacao
Thecc1EG001646 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 8514976-8515975 Theobroma cacao
Thecc1EG001646 1.0kb downstream 1.0kb downstream 5309 true scaffold_1: 8509667-8514975 Theobroma cacao
Thecc1EG001646 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 8509667-8510666 Theobroma cacao
Thecc1EG001646 2.0kb upstream 2.0kb upstream 6309 true scaffold_1: 8510667-8516975 Theobroma cacao
Thecc1EG001646 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 8514976-8516975 Theobroma cacao
Thecc1EG001646 2.0kb downstream 2.0kb downstream 6309 true scaffold_1: 8508667-8514975 Theobroma cacao
Thecc1EG001646 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 8508667-8510666 Theobroma cacao
Thecc1EG001646 5.0kb upstream 5.0kb upstream 9309 true scaffold_1: 8510667-8519975 Theobroma cacao
Thecc1EG001646 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 8514976-8519975 Theobroma cacao
Thecc1EG001646 5.0kb downstream 5.0kb downstream 9309 true scaffold_1: 8505667-8514975 Theobroma cacao
Thecc1EG001646 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 8505667-8510666 Theobroma cacao
Thecc1EG001646 10.0kb upstream 10.0kb upstream 14309 true scaffold_1: 8510667-8524975 Theobroma cacao
Thecc1EG001646 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 8514976-8524975 Theobroma cacao
Thecc1EG001646 10.0kb downstream 10.0kb downstream 14309 true scaffold_1: 8500667-8514975 Theobroma cacao
Thecc1EG001646 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 8500667-8510666 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026433 5273 Angiosperm View MSA
123834108 5264 Brassicales-Malvales View MSA
124340985 5266 SBM View MSA
124242304 5268 Malvidae View MSA
124066678 5270 Rosid View MSA
123738985 5271 Pentapetalae View MSA
122791579 5272 Eudicot View MSA
121344234 5274 Embryophyte View MSA
123380011 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain