Gene : Thecc1EG001647 T. cacao v1.1
Defline:  (1 of 3) K12158 - ubiquitin-like protein Nedd8 (NEDD8) Genomic Order:  1409
Name:  ? Thecc1EG001647 Secondary Identifier:  ? PAC:27437286
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG001647 0.5kb upstream 0.5kb upstream 2543 true scaffold_1: 8514680-8517222 Theobroma cacao
Thecc1EG001647 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 8514680-8515179 Theobroma cacao
Thecc1EG001647 0.5kb downstream 0.5kb downstream 2543 true scaffold_1: 8515180-8517722 Theobroma cacao
Thecc1EG001647 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 8517223-8517722 Theobroma cacao
Thecc1EG001647 1.0kb upstream 1.0kb upstream 3043 true scaffold_1: 8514180-8517222 Theobroma cacao
Thecc1EG001647 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 8514180-8515179 Theobroma cacao
Thecc1EG001647 1.0kb downstream 1.0kb downstream 3043 true scaffold_1: 8515180-8518222 Theobroma cacao
Thecc1EG001647 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 8517223-8518222 Theobroma cacao
Thecc1EG001647 2.0kb upstream 2.0kb upstream 4043 true scaffold_1: 8513180-8517222 Theobroma cacao
Thecc1EG001647 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 8513180-8515179 Theobroma cacao
Thecc1EG001647 2.0kb downstream 2.0kb downstream 4043 true scaffold_1: 8515180-8519222 Theobroma cacao
Thecc1EG001647 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 8517223-8519222 Theobroma cacao
Thecc1EG001647 5.0kb upstream 5.0kb upstream 7043 true scaffold_1: 8510180-8517222 Theobroma cacao
Thecc1EG001647 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 8510180-8515179 Theobroma cacao
Thecc1EG001647 5.0kb downstream 5.0kb downstream 7043 true scaffold_1: 8515180-8522222 Theobroma cacao
Thecc1EG001647 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 8517223-8522222 Theobroma cacao
Thecc1EG001647 10.0kb upstream 10.0kb upstream 12043 true scaffold_1: 8505180-8517222 Theobroma cacao
Thecc1EG001647 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 8505180-8515179 Theobroma cacao
Thecc1EG001647 10.0kb downstream 10.0kb downstream 12043 true scaffold_1: 8515180-8527222 Theobroma cacao
Thecc1EG001647 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 8517223-8527222 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029747 5273 Angiosperm View MSA
123837115 5264 Brassicales-Malvales View MSA
124349977 5266 SBM View MSA
124250054 5268 Malvidae View MSA
124062701 5270 Rosid View MSA
123752540 5271 Pentapetalae View MSA
122796500 5272 Eudicot View MSA
121351277 5274 Embryophyte View MSA
123428084 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain