Gene : Thecc1EG001909 T. cacao v1.1
Defline:  (1 of 1) 1.5.3.16//1.5.3.17 - Spermine oxidase / SMO // Non-specific polyamine oxidase / Polyamine oxidase Genomic Order:  1605
Name:  ? Thecc1EG001909 Secondary Identifier:  ? PAC:27432366
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6441 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG001909 0.5kb upstream 0.5kb upstream 5916 true scaffold_1: 10211208-10217123 Theobroma cacao
Thecc1EG001909 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 10216624-10217123 Theobroma cacao
Thecc1EG001909 0.5kb downstream 0.5kb downstream 5916 true scaffold_1: 10210708-10216623 Theobroma cacao
Thecc1EG001909 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 10210708-10211207 Theobroma cacao
Thecc1EG001909 1.0kb upstream 1.0kb upstream 6416 true scaffold_1: 10211208-10217623 Theobroma cacao
Thecc1EG001909 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 10216624-10217623 Theobroma cacao
Thecc1EG001909 1.0kb downstream 1.0kb downstream 6416 true scaffold_1: 10210208-10216623 Theobroma cacao
Thecc1EG001909 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 10210208-10211207 Theobroma cacao
Thecc1EG001909 2.0kb upstream 2.0kb upstream 7416 true scaffold_1: 10211208-10218623 Theobroma cacao
Thecc1EG001909 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 10216624-10218623 Theobroma cacao
Thecc1EG001909 2.0kb downstream 2.0kb downstream 7416 true scaffold_1: 10209208-10216623 Theobroma cacao
Thecc1EG001909 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 10209208-10211207 Theobroma cacao
Thecc1EG001909 5.0kb upstream 5.0kb upstream 10416 true scaffold_1: 10211208-10221623 Theobroma cacao
Thecc1EG001909 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 10216624-10221623 Theobroma cacao
Thecc1EG001909 5.0kb downstream 5.0kb downstream 10416 true scaffold_1: 10206208-10216623 Theobroma cacao
Thecc1EG001909 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 10206208-10211207 Theobroma cacao
Thecc1EG001909 10.0kb upstream 10.0kb upstream 15416 true scaffold_1: 10211208-10226623 Theobroma cacao
Thecc1EG001909 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 10216624-10226623 Theobroma cacao
Thecc1EG001909 10.0kb downstream 10.0kb downstream 15416 true scaffold_1: 10201208-10216623 Theobroma cacao
Thecc1EG001909 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 10201208-10211207 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831271 5264 Brassicales-Malvales View MSA
124342575 5266 SBM View MSA
124244923 5268 Malvidae View MSA
124065173 5270 Rosid View MSA
123745734 5271 Pentapetalae View MSA
122788869 5272 Eudicot View MSA
122044597 5273 Angiosperm View MSA
121345919 5274 Embryophyte View MSA
123428250 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain