Gene : Thecc1EG001888 T. cacao v1.1

Defline:  (1 of 1) PTHR27001//PTHR27001:SF221 - FAMILY NOT NAMED // PROTEIN KINASE FAMILY PROTEIN Genomic Order:  1590
Name:  ? Thecc1EG001888 Secondary Identifier:  ? PAC:27433342

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG001888 0.5kb upstream 0.5kb upstream 4971 true scaffold_1: 10042282-10047252 Theobroma cacao
Thecc1EG001888 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 10046753-10047252 Theobroma cacao
Thecc1EG001888 0.5kb downstream 0.5kb downstream 4971 true scaffold_1: 10041782-10046752 Theobroma cacao
Thecc1EG001888 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 10041782-10042281 Theobroma cacao
Thecc1EG001888 1.0kb upstream 1.0kb upstream 5471 true scaffold_1: 10042282-10047752 Theobroma cacao
Thecc1EG001888 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 10046753-10047752 Theobroma cacao
Thecc1EG001888 1.0kb downstream 1.0kb downstream 5471 true scaffold_1: 10041282-10046752 Theobroma cacao
Thecc1EG001888 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 10041282-10042281 Theobroma cacao
Thecc1EG001888 2.0kb upstream 2.0kb upstream 6471 true scaffold_1: 10042282-10048752 Theobroma cacao
Thecc1EG001888 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 10046753-10048752 Theobroma cacao
Thecc1EG001888 2.0kb downstream 2.0kb downstream 6471 true scaffold_1: 10040282-10046752 Theobroma cacao
Thecc1EG001888 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 10040282-10042281 Theobroma cacao
Thecc1EG001888 5.0kb upstream 5.0kb upstream 9471 true scaffold_1: 10042282-10051752 Theobroma cacao
Thecc1EG001888 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 10046753-10051752 Theobroma cacao
Thecc1EG001888 5.0kb downstream 5.0kb downstream 9471 true scaffold_1: 10037282-10046752 Theobroma cacao
Thecc1EG001888 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 10037282-10042281 Theobroma cacao
Thecc1EG001888 10.0kb upstream 10.0kb upstream 14471 true scaffold_1: 10042282-10056752 Theobroma cacao
Thecc1EG001888 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 10046753-10056752 Theobroma cacao
Thecc1EG001888 10.0kb downstream 10.0kb downstream 14471 true scaffold_1: 10032282-10046752 Theobroma cacao
Thecc1EG001888 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 10032282-10042281 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838721 5264 Brassicales-Malvales View MSA
124338980 5266 SBM View MSA
124251696 5268 Malvidae View MSA
124074886 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain