Gene : Thecc1EG001835 T. cacao v1.1
Defline:  (1 of 1) PTHR12300//PTHR12300:SF27 - HVA22-LIKE PROTEINS // HVA22-LIKE PROTEIN F Genomic Order:  1552
Name:  ? Thecc1EG001835 Secondary Identifier:  ? PAC:27436568
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG001835 0.5kb upstream 0.5kb upstream 3415 true scaffold_1: 9718309-9721723 Theobroma cacao
Thecc1EG001835 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 9721224-9721723 Theobroma cacao
Thecc1EG001835 0.5kb downstream 0.5kb downstream 3415 true scaffold_1: 9717809-9721223 Theobroma cacao
Thecc1EG001835 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 9717809-9718308 Theobroma cacao
Thecc1EG001835 1.0kb upstream 1.0kb upstream 3915 true scaffold_1: 9718309-9722223 Theobroma cacao
Thecc1EG001835 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 9721224-9722223 Theobroma cacao
Thecc1EG001835 1.0kb downstream 1.0kb downstream 3915 true scaffold_1: 9717309-9721223 Theobroma cacao
Thecc1EG001835 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 9717309-9718308 Theobroma cacao
Thecc1EG001835 2.0kb upstream 2.0kb upstream 4915 true scaffold_1: 9718309-9723223 Theobroma cacao
Thecc1EG001835 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 9721224-9723223 Theobroma cacao
Thecc1EG001835 2.0kb downstream 2.0kb downstream 4915 true scaffold_1: 9716309-9721223 Theobroma cacao
Thecc1EG001835 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 9716309-9718308 Theobroma cacao
Thecc1EG001835 5.0kb upstream 5.0kb upstream 7915 true scaffold_1: 9718309-9726223 Theobroma cacao
Thecc1EG001835 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 9721224-9726223 Theobroma cacao
Thecc1EG001835 5.0kb downstream 5.0kb downstream 7915 true scaffold_1: 9713309-9721223 Theobroma cacao
Thecc1EG001835 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 9713309-9718308 Theobroma cacao
Thecc1EG001835 10.0kb upstream 10.0kb upstream 12915 true scaffold_1: 9718309-9731223 Theobroma cacao
Thecc1EG001835 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 9721224-9731223 Theobroma cacao
Thecc1EG001835 10.0kb downstream 10.0kb downstream 12915 true scaffold_1: 9708309-9721223 Theobroma cacao
Thecc1EG001835 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 9708309-9718308 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840163 5264 Brassicales-Malvales View MSA
124343528 5266 SBM View MSA
124237128 5268 Malvidae View MSA
124064261 5270 Rosid View MSA
123742916 5271 Pentapetalae View MSA
122793296 5272 Eudicot View MSA
122047958 5273 Angiosperm View MSA
121349779 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain