Gene : Thecc1EG001841 T. cacao v1.1
Defline:  (1 of 1) PTHR11945//PTHR11945:SF150 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL1-RELATED Genomic Order:  1555
Name:  ? Thecc1EG001841 Secondary Identifier:  ? PAC:27434473
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG001841 0.5kb upstream 0.5kb upstream 16031 true scaffold_1: 9754435-9770465 Theobroma cacao
Thecc1EG001841 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 9754435-9754934 Theobroma cacao
Thecc1EG001841 0.5kb downstream 0.5kb downstream 16031 true scaffold_1: 9754935-9770965 Theobroma cacao
Thecc1EG001841 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 9770466-9770965 Theobroma cacao
Thecc1EG001841 1.0kb upstream 1.0kb upstream 16531 true scaffold_1: 9753935-9770465 Theobroma cacao
Thecc1EG001841 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 9753935-9754934 Theobroma cacao
Thecc1EG001841 1.0kb downstream 1.0kb downstream 16531 true scaffold_1: 9754935-9771465 Theobroma cacao
Thecc1EG001841 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 9770466-9771465 Theobroma cacao
Thecc1EG001841 2.0kb upstream 2.0kb upstream 17531 true scaffold_1: 9752935-9770465 Theobroma cacao
Thecc1EG001841 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 9752935-9754934 Theobroma cacao
Thecc1EG001841 2.0kb downstream 2.0kb downstream 17531 true scaffold_1: 9754935-9772465 Theobroma cacao
Thecc1EG001841 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 9770466-9772465 Theobroma cacao
Thecc1EG001841 5.0kb upstream 5.0kb upstream 20531 true scaffold_1: 9749935-9770465 Theobroma cacao
Thecc1EG001841 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 9749935-9754934 Theobroma cacao
Thecc1EG001841 5.0kb downstream 5.0kb downstream 20531 true scaffold_1: 9754935-9775465 Theobroma cacao
Thecc1EG001841 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 9770466-9775465 Theobroma cacao
Thecc1EG001841 10.0kb upstream 10.0kb upstream 25531 true scaffold_1: 9744935-9770465 Theobroma cacao
Thecc1EG001841 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 9744935-9754934 Theobroma cacao
Thecc1EG001841 10.0kb downstream 10.0kb downstream 25531 true scaffold_1: 9754935-9780465 Theobroma cacao
Thecc1EG001841 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 9770466-9780465 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838020 5264 Brassicales-Malvales View MSA
124349939 5266 SBM View MSA
124253433 5268 Malvidae View MSA
124063483 5270 Rosid View MSA
123747867 5271 Pentapetalae View MSA
122793842 5272 Eudicot View MSA
122049629 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain