Gene : Thecc1EG002124 T. cacao v1.1

Defline:  (1 of 2) K09775 - hypothetical protein (K09775) Genomic Order:  1731
Name:  ? Thecc1EG002124 Secondary Identifier:  ? PAC:27435396

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG002124 0.5kb upstream 0.5kb upstream 5862 true scaffold_1: 11847007-11852868 Theobroma cacao
Thecc1EG002124 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 11852369-11852868 Theobroma cacao
Thecc1EG002124 0.5kb downstream 0.5kb downstream 5862 true scaffold_1: 11846507-11852368 Theobroma cacao
Thecc1EG002124 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 11846507-11847006 Theobroma cacao
Thecc1EG002124 1.0kb upstream 1.0kb upstream 6362 true scaffold_1: 11847007-11853368 Theobroma cacao
Thecc1EG002124 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 11852369-11853368 Theobroma cacao
Thecc1EG002124 1.0kb downstream 1.0kb downstream 6362 true scaffold_1: 11846007-11852368 Theobroma cacao
Thecc1EG002124 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 11846007-11847006 Theobroma cacao
Thecc1EG002124 2.0kb upstream 2.0kb upstream 7362 true scaffold_1: 11847007-11854368 Theobroma cacao
Thecc1EG002124 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 11852369-11854368 Theobroma cacao
Thecc1EG002124 2.0kb downstream 2.0kb downstream 7362 true scaffold_1: 11845007-11852368 Theobroma cacao
Thecc1EG002124 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 11845007-11847006 Theobroma cacao
Thecc1EG002124 5.0kb upstream 5.0kb upstream 10362 true scaffold_1: 11847007-11857368 Theobroma cacao
Thecc1EG002124 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 11852369-11857368 Theobroma cacao
Thecc1EG002124 5.0kb downstream 5.0kb downstream 10362 true scaffold_1: 11842007-11852368 Theobroma cacao
Thecc1EG002124 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 11842007-11847006 Theobroma cacao
Thecc1EG002124 10.0kb upstream 10.0kb upstream 15362 true scaffold_1: 11847007-11862368 Theobroma cacao
Thecc1EG002124 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 11852369-11862368 Theobroma cacao
Thecc1EG002124 10.0kb downstream 10.0kb downstream 15362 true scaffold_1: 11837007-11852368 Theobroma cacao
Thecc1EG002124 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 11837007-11847006 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838306 5264 Brassicales-Malvales View MSA
124345471 5266 SBM View MSA
124251459 5268 Malvidae View MSA
124064436 5270 Rosid View MSA
123747764 5271 Pentapetalae View MSA
122794192 5272 Eudicot View MSA
122050620 5273 Angiosperm View MSA
123429132 5275 Viridiplantae View MSA
121350526 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain