Gene : Thecc1EG002116 T. cacao v1.1
Defline:  (1 of 4) PF06364 - Protein of unknown function (DUF1068) (DUF1068) Genomic Order:  1725
Name:  ? Thecc1EG002116 Secondary Identifier:  ? PAC:27434222
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG002116 0.5kb upstream 0.5kb upstream 3461 true scaffold_1: 11817826-11821286 Theobroma cacao
Thecc1EG002116 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 11817826-11818325 Theobroma cacao
Thecc1EG002116 0.5kb downstream 0.5kb downstream 3461 true scaffold_1: 11818326-11821786 Theobroma cacao
Thecc1EG002116 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 11821287-11821786 Theobroma cacao
Thecc1EG002116 1.0kb upstream 1.0kb upstream 3961 true scaffold_1: 11817326-11821286 Theobroma cacao
Thecc1EG002116 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 11817326-11818325 Theobroma cacao
Thecc1EG002116 1.0kb downstream 1.0kb downstream 3961 true scaffold_1: 11818326-11822286 Theobroma cacao
Thecc1EG002116 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 11821287-11822286 Theobroma cacao
Thecc1EG002116 2.0kb upstream 2.0kb upstream 4961 true scaffold_1: 11816326-11821286 Theobroma cacao
Thecc1EG002116 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 11816326-11818325 Theobroma cacao
Thecc1EG002116 2.0kb downstream 2.0kb downstream 4961 true scaffold_1: 11818326-11823286 Theobroma cacao
Thecc1EG002116 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 11821287-11823286 Theobroma cacao
Thecc1EG002116 5.0kb upstream 5.0kb upstream 7961 true scaffold_1: 11813326-11821286 Theobroma cacao
Thecc1EG002116 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 11813326-11818325 Theobroma cacao
Thecc1EG002116 5.0kb downstream 5.0kb downstream 7961 true scaffold_1: 11818326-11826286 Theobroma cacao
Thecc1EG002116 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 11821287-11826286 Theobroma cacao
Thecc1EG002116 10.0kb upstream 10.0kb upstream 12961 true scaffold_1: 11808326-11821286 Theobroma cacao
Thecc1EG002116 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 11808326-11818325 Theobroma cacao
Thecc1EG002116 10.0kb downstream 10.0kb downstream 12961 true scaffold_1: 11818326-11831286 Theobroma cacao
Thecc1EG002116 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 11821287-11831286 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838591 5264 Brassicales-Malvales View MSA
124338530 5266 SBM View MSA
124244025 5268 Malvidae View MSA
124061642 5270 Rosid View MSA
123748678 5271 Pentapetalae View MSA
122794910 5272 Eudicot View MSA
122051636 5273 Angiosperm View MSA
121349582 5274 Embryophyte View MSA
123381363 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain