Gene : Thecc1EG002076 T. cacao v1.1
Defline:  (1 of 1) 1.3.3.3 - Coproporphyrinogen oxidase / Coproporphyrinogenase Genomic Order:  1708
Name:  ? Thecc1EG002076 Secondary Identifier:  ? PAC:27432334
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao CHLOROPHYLL-SYN Theobroma cacao pathologic  
Tcacao HEME-BIOSYNTHESIS-II Theobroma cacao pathologic  
Tcacao PWY-5918 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG002076 0.5kb upstream 0.5kb upstream 5940 true scaffold_1: 11461582-11467521 Theobroma cacao
Thecc1EG002076 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 11467022-11467521 Theobroma cacao
Thecc1EG002076 0.5kb downstream 0.5kb downstream 5940 true scaffold_1: 11461082-11467021 Theobroma cacao
Thecc1EG002076 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 11461082-11461581 Theobroma cacao
Thecc1EG002076 1.0kb upstream 1.0kb upstream 6440 true scaffold_1: 11461582-11468021 Theobroma cacao
Thecc1EG002076 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 11467022-11468021 Theobroma cacao
Thecc1EG002076 1.0kb downstream 1.0kb downstream 6440 true scaffold_1: 11460582-11467021 Theobroma cacao
Thecc1EG002076 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 11460582-11461581 Theobroma cacao
Thecc1EG002076 2.0kb upstream 2.0kb upstream 7440 true scaffold_1: 11461582-11469021 Theobroma cacao
Thecc1EG002076 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 11467022-11469021 Theobroma cacao
Thecc1EG002076 2.0kb downstream 2.0kb downstream 7440 true scaffold_1: 11459582-11467021 Theobroma cacao
Thecc1EG002076 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 11459582-11461581 Theobroma cacao
Thecc1EG002076 5.0kb upstream 5.0kb upstream 10440 true scaffold_1: 11461582-11472021 Theobroma cacao
Thecc1EG002076 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 11467022-11472021 Theobroma cacao
Thecc1EG002076 5.0kb downstream 5.0kb downstream 10440 true scaffold_1: 11456582-11467021 Theobroma cacao
Thecc1EG002076 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 11456582-11461581 Theobroma cacao
Thecc1EG002076 10.0kb upstream 10.0kb upstream 15440 true scaffold_1: 11461582-11477021 Theobroma cacao
Thecc1EG002076 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 11467022-11477021 Theobroma cacao
Thecc1EG002076 10.0kb downstream 10.0kb downstream 15440 true scaffold_1: 11451582-11467021 Theobroma cacao
Thecc1EG002076 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 11451582-11461581 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838034 5264 Brassicales-Malvales View MSA
124337231 5266 SBM View MSA
124243280 5268 Malvidae View MSA
124062707 5270 Rosid View MSA
123737615 5271 Pentapetalae View MSA
122790941 5272 Eudicot View MSA
122043250 5273 Angiosperm View MSA
121345223 5274 Embryophyte View MSA
123424727 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain