Gene : Thecc1EG002380 T. cacao v1.1
Defline:  (1 of 4) PTHR11709//PTHR11709:SF118 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED Genomic Order:  1886
Name:  ? Thecc1EG002380 Secondary Identifier:  ? PAC:27437467
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5466 Theobroma cacao pathologic  
Tcacao PWY-6824 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG002380 0.5kb upstream 0.5kb upstream 9260 true scaffold_1: 13526975-13536234 Theobroma cacao
Thecc1EG002380 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 13535735-13536234 Theobroma cacao
Thecc1EG002380 0.5kb downstream 0.5kb downstream 9260 true scaffold_1: 13526475-13535734 Theobroma cacao
Thecc1EG002380 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 13526475-13526974 Theobroma cacao
Thecc1EG002380 1.0kb upstream 1.0kb upstream 9760 true scaffold_1: 13526975-13536734 Theobroma cacao
Thecc1EG002380 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 13535735-13536734 Theobroma cacao
Thecc1EG002380 1.0kb downstream 1.0kb downstream 9760 true scaffold_1: 13525975-13535734 Theobroma cacao
Thecc1EG002380 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 13525975-13526974 Theobroma cacao
Thecc1EG002380 2.0kb upstream 2.0kb upstream 10760 true scaffold_1: 13526975-13537734 Theobroma cacao
Thecc1EG002380 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 13535735-13537734 Theobroma cacao
Thecc1EG002380 2.0kb downstream 2.0kb downstream 10760 true scaffold_1: 13524975-13535734 Theobroma cacao
Thecc1EG002380 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 13524975-13526974 Theobroma cacao
Thecc1EG002380 5.0kb upstream 5.0kb upstream 13760 true scaffold_1: 13526975-13540734 Theobroma cacao
Thecc1EG002380 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 13535735-13540734 Theobroma cacao
Thecc1EG002380 5.0kb downstream 5.0kb downstream 13760 true scaffold_1: 13521975-13535734 Theobroma cacao
Thecc1EG002380 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 13521975-13526974 Theobroma cacao
Thecc1EG002380 10.0kb upstream 10.0kb upstream 18760 true scaffold_1: 13526975-13545734 Theobroma cacao
Thecc1EG002380 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 13535735-13545734 Theobroma cacao
Thecc1EG002380 10.0kb downstream 10.0kb downstream 18760 true scaffold_1: 13516975-13535734 Theobroma cacao
Thecc1EG002380 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 13516975-13526974 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123823958 5264 Brassicales-Malvales View MSA
124320001 5266 SBM View MSA
124253162 5268 Malvidae View MSA
124074925 5270 Rosid View MSA
123753088 5271 Pentapetalae View MSA
122795935 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain