Gene : Thecc1EG002333 T. cacao v1.1
Defline:  (1 of 1) K08913 - light-harvesting complex II chlorophyll a/b binding protein 2 (LHCB2) Genomic Order:  1861
Name:  ? Thecc1EG002333 Secondary Identifier:  ? PAC:27433319
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG002333 0.5kb upstream 0.5kb upstream 2590 true scaffold_1: 13216280-13218869 Theobroma cacao
Thecc1EG002333 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 13218370-13218869 Theobroma cacao
Thecc1EG002333 0.5kb downstream 0.5kb downstream 2590 true scaffold_1: 13215780-13218369 Theobroma cacao
Thecc1EG002333 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 13215780-13216279 Theobroma cacao
Thecc1EG002333 1.0kb upstream 1.0kb upstream 3090 true scaffold_1: 13216280-13219369 Theobroma cacao
Thecc1EG002333 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 13218370-13219369 Theobroma cacao
Thecc1EG002333 1.0kb downstream 1.0kb downstream 3090 true scaffold_1: 13215280-13218369 Theobroma cacao
Thecc1EG002333 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 13215280-13216279 Theobroma cacao
Thecc1EG002333 2.0kb upstream 2.0kb upstream 4090 true scaffold_1: 13216280-13220369 Theobroma cacao
Thecc1EG002333 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 13218370-13220369 Theobroma cacao
Thecc1EG002333 2.0kb downstream 2.0kb downstream 4090 true scaffold_1: 13214280-13218369 Theobroma cacao
Thecc1EG002333 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 13214280-13216279 Theobroma cacao
Thecc1EG002333 5.0kb upstream 5.0kb upstream 7090 true scaffold_1: 13216280-13223369 Theobroma cacao
Thecc1EG002333 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 13218370-13223369 Theobroma cacao
Thecc1EG002333 5.0kb downstream 5.0kb downstream 7090 true scaffold_1: 13211280-13218369 Theobroma cacao
Thecc1EG002333 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 13211280-13216279 Theobroma cacao
Thecc1EG002333 10.0kb upstream 10.0kb upstream 12090 true scaffold_1: 13216280-13228369 Theobroma cacao
Thecc1EG002333 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 13218370-13228369 Theobroma cacao
Thecc1EG002333 10.0kb downstream 10.0kb downstream 12090 true scaffold_1: 13206280-13218369 Theobroma cacao
Thecc1EG002333 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 13206280-13216279 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041019 5273 Angiosperm View MSA
123832323 5264 Brassicales-Malvales View MSA
124343907 5266 SBM View MSA
124251420 5268 Malvidae View MSA
124062505 5270 Rosid View MSA
123749191 5271 Pentapetalae View MSA
122791500 5272 Eudicot View MSA
121349648 5274 Embryophyte View MSA
123426313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain