Gene : Thecc1EG002266 T. cacao v1.1
Defline:  (1 of 1) PTHR11712//PTHR11712:SF275 - POLYKETIDE SYNTHASE-RELATED // 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE, MITOCHONDRIAL Genomic Order:  1823
Name:  ? Thecc1EG002266 Secondary Identifier:  ? PAC:27435098
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao FASYN-ELONG-PWY Theobroma cacao pathologic  
Tcacao PWY-5156 Theobroma cacao pathologic  
Tcacao PWY-5971 Theobroma cacao pathologic  
Tcacao PWY-5989 Theobroma cacao pathologic  
Tcacao PWY-6282 Theobroma cacao pathologic  
Tcacao PWY-7388 Theobroma cacao pathologic  
Tcacao PWY-7663 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG002266 0.5kb upstream 0.5kb upstream 6668 true scaffold_1: 12734621-12741288 Theobroma cacao
Thecc1EG002266 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 12740789-12741288 Theobroma cacao
Thecc1EG002266 0.5kb downstream 0.5kb downstream 6668 true scaffold_1: 12734121-12740788 Theobroma cacao
Thecc1EG002266 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 12734121-12734620 Theobroma cacao
Thecc1EG002266 1.0kb upstream 1.0kb upstream 7168 true scaffold_1: 12734621-12741788 Theobroma cacao
Thecc1EG002266 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 12740789-12741788 Theobroma cacao
Thecc1EG002266 1.0kb downstream 1.0kb downstream 7168 true scaffold_1: 12733621-12740788 Theobroma cacao
Thecc1EG002266 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 12733621-12734620 Theobroma cacao
Thecc1EG002266 2.0kb upstream 2.0kb upstream 8168 true scaffold_1: 12734621-12742788 Theobroma cacao
Thecc1EG002266 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 12740789-12742788 Theobroma cacao
Thecc1EG002266 2.0kb downstream 2.0kb downstream 8168 true scaffold_1: 12732621-12740788 Theobroma cacao
Thecc1EG002266 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 12732621-12734620 Theobroma cacao
Thecc1EG002266 5.0kb upstream 5.0kb upstream 11168 true scaffold_1: 12734621-12745788 Theobroma cacao
Thecc1EG002266 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 12740789-12745788 Theobroma cacao
Thecc1EG002266 5.0kb downstream 5.0kb downstream 11168 true scaffold_1: 12729621-12740788 Theobroma cacao
Thecc1EG002266 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 12729621-12734620 Theobroma cacao
Thecc1EG002266 10.0kb upstream 10.0kb upstream 16168 true scaffold_1: 12734621-12750788 Theobroma cacao
Thecc1EG002266 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 12740789-12750788 Theobroma cacao
Thecc1EG002266 10.0kb downstream 10.0kb downstream 16168 true scaffold_1: 12724621-12740788 Theobroma cacao
Thecc1EG002266 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 12724621-12734620 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829991 5264 Brassicales-Malvales View MSA
124344955 5266 SBM View MSA
124240268 5268 Malvidae View MSA
124060523 5270 Rosid View MSA
123738041 5271 Pentapetalae View MSA
122786623 5272 Eudicot View MSA
122051170 5273 Angiosperm View MSA
121345587 5274 Embryophyte View MSA
123424058 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain