Gene : Thecc1EG002185 T. cacao v1.1
Defline:  (1 of 1) KOG0265//KOG0286//KOG0645//KOG1407//KOG4497 - U5 snRNP-specific protein-like factor and related proteins // G-protein beta subunit // WD40 repeat protein // WD40 repeat protein // Uncharacterized conserved protein WDR8, contains WD repeats Genomic Order:  1777
Name:  ? Thecc1EG002185 Secondary Identifier:  ? PAC:27437034
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG002185 0.5kb upstream 0.5kb upstream 33425 true scaffold_1: 12200498-12233922 Theobroma cacao
Thecc1EG002185 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 12233423-12233922 Theobroma cacao
Thecc1EG002185 0.5kb downstream 0.5kb downstream 33425 true scaffold_1: 12199998-12233422 Theobroma cacao
Thecc1EG002185 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 12199998-12200497 Theobroma cacao
Thecc1EG002185 1.0kb upstream 1.0kb upstream 33925 true scaffold_1: 12200498-12234422 Theobroma cacao
Thecc1EG002185 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 12233423-12234422 Theobroma cacao
Thecc1EG002185 1.0kb downstream 1.0kb downstream 33925 true scaffold_1: 12199498-12233422 Theobroma cacao
Thecc1EG002185 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 12199498-12200497 Theobroma cacao
Thecc1EG002185 2.0kb upstream 2.0kb upstream 34925 true scaffold_1: 12200498-12235422 Theobroma cacao
Thecc1EG002185 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 12233423-12235422 Theobroma cacao
Thecc1EG002185 2.0kb downstream 2.0kb downstream 34925 true scaffold_1: 12198498-12233422 Theobroma cacao
Thecc1EG002185 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 12198498-12200497 Theobroma cacao
Thecc1EG002185 5.0kb upstream 5.0kb upstream 37925 true scaffold_1: 12200498-12238422 Theobroma cacao
Thecc1EG002185 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 12233423-12238422 Theobroma cacao
Thecc1EG002185 5.0kb downstream 5.0kb downstream 37925 true scaffold_1: 12195498-12233422 Theobroma cacao
Thecc1EG002185 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 12195498-12200497 Theobroma cacao
Thecc1EG002185 10.0kb upstream 10.0kb upstream 42925 true scaffold_1: 12200498-12243422 Theobroma cacao
Thecc1EG002185 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 12233423-12243422 Theobroma cacao
Thecc1EG002185 10.0kb downstream 10.0kb downstream 42925 true scaffold_1: 12190498-12233422 Theobroma cacao
Thecc1EG002185 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 12190498-12200497 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832054 5264 Brassicales-Malvales View MSA
124341887 5266 SBM View MSA
124240540 5268 Malvidae View MSA
124074253 5270 Rosid View MSA
123741862 5271 Pentapetalae View MSA
122790393 5272 Eudicot View MSA
122044386 5273 Angiosperm View MSA
121345400 5274 Embryophyte View MSA
123427986 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain