Gene : Thecc1EG002533 T. cacao v1.1
Defline:  (1 of 1) PTHR31742:SF1 - RPA-INTERACTING PROTEIN Genomic Order:  1981
Name:  ? Thecc1EG002533 Secondary Identifier:  ? PAC:27432038
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG002533 0.5kb upstream 0.5kb upstream 3730 true scaffold_1: 14507706-14511435 Theobroma cacao
Thecc1EG002533 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 14507706-14508205 Theobroma cacao
Thecc1EG002533 0.5kb downstream 0.5kb downstream 3730 true scaffold_1: 14508206-14511935 Theobroma cacao
Thecc1EG002533 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 14511436-14511935 Theobroma cacao
Thecc1EG002533 1.0kb upstream 1.0kb upstream 4230 true scaffold_1: 14507206-14511435 Theobroma cacao
Thecc1EG002533 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 14507206-14508205 Theobroma cacao
Thecc1EG002533 1.0kb downstream 1.0kb downstream 4230 true scaffold_1: 14508206-14512435 Theobroma cacao
Thecc1EG002533 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 14511436-14512435 Theobroma cacao
Thecc1EG002533 2.0kb upstream 2.0kb upstream 5230 true scaffold_1: 14506206-14511435 Theobroma cacao
Thecc1EG002533 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 14506206-14508205 Theobroma cacao
Thecc1EG002533 2.0kb downstream 2.0kb downstream 5230 true scaffold_1: 14508206-14513435 Theobroma cacao
Thecc1EG002533 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 14511436-14513435 Theobroma cacao
Thecc1EG002533 5.0kb upstream 5.0kb upstream 8230 true scaffold_1: 14503206-14511435 Theobroma cacao
Thecc1EG002533 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 14503206-14508205 Theobroma cacao
Thecc1EG002533 5.0kb downstream 5.0kb downstream 8230 true scaffold_1: 14508206-14516435 Theobroma cacao
Thecc1EG002533 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 14511436-14516435 Theobroma cacao
Thecc1EG002533 10.0kb upstream 10.0kb upstream 13230 true scaffold_1: 14498206-14511435 Theobroma cacao
Thecc1EG002533 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 14498206-14508205 Theobroma cacao
Thecc1EG002533 10.0kb downstream 10.0kb downstream 13230 true scaffold_1: 14508206-14521435 Theobroma cacao
Thecc1EG002533 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 14511436-14521435 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829444 5264 Brassicales-Malvales View MSA
124341150 5266 SBM View MSA
124237734 5268 Malvidae View MSA
124061489 5270 Rosid View MSA
123739858 5271 Pentapetalae View MSA
122789905 5272 Eudicot View MSA
122044802 5273 Angiosperm View MSA
121346952 5274 Embryophyte View MSA
123424751 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain