Gene : Thecc1EG002458 T. cacao v1.1

Defline:  (1 of 1) PTHR31717//PTHR31717:SF8 - FAMILY NOT NAMED // ZINC FINGER PROTEIN CONSTANS-LIKE 10-RELATED Genomic Order:  1935
Name:  ? Thecc1EG002458 Secondary Identifier:  ? PAC:27436210

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG002458 0.5kb upstream 0.5kb upstream 6561 true scaffold_1: 14020191-14026751 Theobroma cacao
Thecc1EG002458 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 14026252-14026751 Theobroma cacao
Thecc1EG002458 0.5kb downstream 0.5kb downstream 6561 true scaffold_1: 14019691-14026251 Theobroma cacao
Thecc1EG002458 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 14019691-14020190 Theobroma cacao
Thecc1EG002458 1.0kb upstream 1.0kb upstream 7061 true scaffold_1: 14020191-14027251 Theobroma cacao
Thecc1EG002458 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 14026252-14027251 Theobroma cacao
Thecc1EG002458 1.0kb downstream 1.0kb downstream 7061 true scaffold_1: 14019191-14026251 Theobroma cacao
Thecc1EG002458 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 14019191-14020190 Theobroma cacao
Thecc1EG002458 2.0kb upstream 2.0kb upstream 8061 true scaffold_1: 14020191-14028251 Theobroma cacao
Thecc1EG002458 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 14026252-14028251 Theobroma cacao
Thecc1EG002458 2.0kb downstream 2.0kb downstream 8061 true scaffold_1: 14018191-14026251 Theobroma cacao
Thecc1EG002458 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 14018191-14020190 Theobroma cacao
Thecc1EG002458 5.0kb upstream 5.0kb upstream 11061 true scaffold_1: 14020191-14031251 Theobroma cacao
Thecc1EG002458 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 14026252-14031251 Theobroma cacao
Thecc1EG002458 5.0kb downstream 5.0kb downstream 11061 true scaffold_1: 14015191-14026251 Theobroma cacao
Thecc1EG002458 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 14015191-14020190 Theobroma cacao
Thecc1EG002458 10.0kb upstream 10.0kb upstream 16061 true scaffold_1: 14020191-14036251 Theobroma cacao
Thecc1EG002458 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 14026252-14036251 Theobroma cacao
Thecc1EG002458 10.0kb downstream 10.0kb downstream 16061 true scaffold_1: 14010191-14026251 Theobroma cacao
Thecc1EG002458 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 14010191-14020190 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839244 5264 Brassicales-Malvales View MSA
124351347 5266 SBM View MSA
124243820 5268 Malvidae View MSA
124060563 5270 Rosid View MSA
123751246 5271 Pentapetalae View MSA
122785793 5272 Eudicot View MSA
122049477 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350351 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain