Gene : Thecc1EG002456 T. cacao v1.1
Defline:  (1 of 1) PTHR14155//PTHR14155:SF184 - RING FINGER DOMAIN-CONTAINING // SUBFAMILY NOT NAMED Genomic Order:  1933
Name:  ? Thecc1EG002456 Secondary Identifier:  ? PAC:27431454
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG002456 0.5kb upstream 0.5kb upstream 3650 true scaffold_1: 14006272-14009921 Theobroma cacao
Thecc1EG002456 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 14009422-14009921 Theobroma cacao
Thecc1EG002456 0.5kb downstream 0.5kb downstream 3650 true scaffold_1: 14005772-14009421 Theobroma cacao
Thecc1EG002456 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 14005772-14006271 Theobroma cacao
Thecc1EG002456 1.0kb upstream 1.0kb upstream 4150 true scaffold_1: 14006272-14010421 Theobroma cacao
Thecc1EG002456 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 14009422-14010421 Theobroma cacao
Thecc1EG002456 1.0kb downstream 1.0kb downstream 4150 true scaffold_1: 14005272-14009421 Theobroma cacao
Thecc1EG002456 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 14005272-14006271 Theobroma cacao
Thecc1EG002456 2.0kb upstream 2.0kb upstream 5150 true scaffold_1: 14006272-14011421 Theobroma cacao
Thecc1EG002456 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 14009422-14011421 Theobroma cacao
Thecc1EG002456 2.0kb downstream 2.0kb downstream 5150 true scaffold_1: 14004272-14009421 Theobroma cacao
Thecc1EG002456 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 14004272-14006271 Theobroma cacao
Thecc1EG002456 5.0kb upstream 5.0kb upstream 8150 true scaffold_1: 14006272-14014421 Theobroma cacao
Thecc1EG002456 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 14009422-14014421 Theobroma cacao
Thecc1EG002456 5.0kb downstream 5.0kb downstream 8150 true scaffold_1: 14001272-14009421 Theobroma cacao
Thecc1EG002456 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 14001272-14006271 Theobroma cacao
Thecc1EG002456 10.0kb upstream 10.0kb upstream 13150 true scaffold_1: 14006272-14019421 Theobroma cacao
Thecc1EG002456 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 14009422-14019421 Theobroma cacao
Thecc1EG002456 10.0kb downstream 10.0kb downstream 13150 true scaffold_1: 13996272-14009421 Theobroma cacao
Thecc1EG002456 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 13996272-14006271 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840883 5264 Brassicales-Malvales View MSA
124341869 5266 SBM View MSA
124253814 5268 Malvidae View MSA
124062810 5270 Rosid View MSA
123750154 5271 Pentapetalae View MSA
122792700 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain