Gene : Thecc1EG002426 T. cacao v1.1
Defline:  (1 of 2) 2.3.1.9 - Acetyl-CoA C-acetyltransferase / Acetoacetyl-CoA thiolase Genomic Order:  1912
Name:  ? Thecc1EG002426 Secondary Identifier:  ? PAC:27433994
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao ILEUDEG-PWY Theobroma cacao pathologic  
Tcacao PWY-5910 Theobroma cacao pathologic  
Tcacao PWY-922 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG002426 0.5kb upstream 0.5kb upstream 5472 true scaffold_1: 13845606-13851077 Theobroma cacao
Thecc1EG002426 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 13845606-13846105 Theobroma cacao
Thecc1EG002426 0.5kb downstream 0.5kb downstream 5472 true scaffold_1: 13846106-13851577 Theobroma cacao
Thecc1EG002426 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 13851078-13851577 Theobroma cacao
Thecc1EG002426 1.0kb upstream 1.0kb upstream 5972 true scaffold_1: 13845106-13851077 Theobroma cacao
Thecc1EG002426 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 13845106-13846105 Theobroma cacao
Thecc1EG002426 1.0kb downstream 1.0kb downstream 5972 true scaffold_1: 13846106-13852077 Theobroma cacao
Thecc1EG002426 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 13851078-13852077 Theobroma cacao
Thecc1EG002426 2.0kb upstream 2.0kb upstream 6972 true scaffold_1: 13844106-13851077 Theobroma cacao
Thecc1EG002426 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 13844106-13846105 Theobroma cacao
Thecc1EG002426 2.0kb downstream 2.0kb downstream 6972 true scaffold_1: 13846106-13853077 Theobroma cacao
Thecc1EG002426 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 13851078-13853077 Theobroma cacao
Thecc1EG002426 5.0kb upstream 5.0kb upstream 9972 true scaffold_1: 13841106-13851077 Theobroma cacao
Thecc1EG002426 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 13841106-13846105 Theobroma cacao
Thecc1EG002426 5.0kb downstream 5.0kb downstream 9972 true scaffold_1: 13846106-13856077 Theobroma cacao
Thecc1EG002426 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 13851078-13856077 Theobroma cacao
Thecc1EG002426 10.0kb upstream 10.0kb upstream 14972 true scaffold_1: 13836106-13851077 Theobroma cacao
Thecc1EG002426 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 13836106-13846105 Theobroma cacao
Thecc1EG002426 10.0kb downstream 10.0kb downstream 14972 true scaffold_1: 13846106-13861077 Theobroma cacao
Thecc1EG002426 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 13851078-13861077 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829231 5264 Brassicales-Malvales View MSA
124338302 5266 SBM View MSA
124247085 5268 Malvidae View MSA
124066506 5270 Rosid View MSA
123747270 5271 Pentapetalae View MSA
122788364 5272 Eudicot View MSA
122045789 5273 Angiosperm View MSA
121344005 5274 Embryophyte View MSA
123427573 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain