Gene : Thecc1EG002397 T. cacao v1.1
Defline:  Uncharacterized protein (21%U) Genomic Order:  1894
Name:  ? Thecc1EG002397 Secondary Identifier:  ? PAC:27437371
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG002397 0.5kb upstream 0.5kb upstream 1451 true scaffold_1: 13638460-13639910 Theobroma cacao
Thecc1EG002397 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 13638460-13638959 Theobroma cacao
Thecc1EG002397 0.5kb downstream 0.5kb downstream 1451 true scaffold_1: 13638960-13640410 Theobroma cacao
Thecc1EG002397 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 13639911-13640410 Theobroma cacao
Thecc1EG002397 1.0kb upstream 1.0kb upstream 1951 true scaffold_1: 13637960-13639910 Theobroma cacao
Thecc1EG002397 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 13637960-13638959 Theobroma cacao
Thecc1EG002397 1.0kb downstream 1.0kb downstream 1951 true scaffold_1: 13638960-13640910 Theobroma cacao
Thecc1EG002397 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 13639911-13640910 Theobroma cacao
Thecc1EG002397 2.0kb upstream 2.0kb upstream 2951 true scaffold_1: 13636960-13639910 Theobroma cacao
Thecc1EG002397 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 13636960-13638959 Theobroma cacao
Thecc1EG002397 2.0kb downstream 2.0kb downstream 2951 true scaffold_1: 13638960-13641910 Theobroma cacao
Thecc1EG002397 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 13639911-13641910 Theobroma cacao
Thecc1EG002397 5.0kb upstream 5.0kb upstream 5951 true scaffold_1: 13633960-13639910 Theobroma cacao
Thecc1EG002397 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 13633960-13638959 Theobroma cacao
Thecc1EG002397 5.0kb downstream 5.0kb downstream 5951 true scaffold_1: 13638960-13644910 Theobroma cacao
Thecc1EG002397 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 13639911-13644910 Theobroma cacao
Thecc1EG002397 10.0kb upstream 10.0kb upstream 10951 true scaffold_1: 13628960-13639910 Theobroma cacao
Thecc1EG002397 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 13628960-13638959 Theobroma cacao
Thecc1EG002397 10.0kb downstream 10.0kb downstream 10951 true scaffold_1: 13638960-13649910 Theobroma cacao
Thecc1EG002397 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 13639911-13649910 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834051 5264 Brassicales-Malvales View MSA
124349840 5266 SBM View MSA
124250915 5268 Malvidae View MSA
124070345 5270 Rosid View MSA
123746595 5271 Pentapetalae View MSA
122789663 5272 Eudicot View MSA
122050891 5273 Angiosperm View MSA
121312190 5274 Embryophyte View MSA
123349389 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain