Gene : Thecc1EG002898 T. cacao v1.1
Defline:  Uncharacterized protein Genomic Order:  2179
Name:  ? Thecc1EG002898 Secondary Identifier:  ? PAC:27436273
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG002898 0.5kb upstream 0.5kb upstream 2078 true scaffold_1: 17249848-17251925 Theobroma cacao
Thecc1EG002898 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 17251426-17251925 Theobroma cacao
Thecc1EG002898 0.5kb downstream 0.5kb downstream 2078 true scaffold_1: 17249348-17251425 Theobroma cacao
Thecc1EG002898 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 17249348-17249847 Theobroma cacao
Thecc1EG002898 1.0kb upstream 1.0kb upstream 2578 true scaffold_1: 17249848-17252425 Theobroma cacao
Thecc1EG002898 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 17251426-17252425 Theobroma cacao
Thecc1EG002898 1.0kb downstream 1.0kb downstream 2578 true scaffold_1: 17248848-17251425 Theobroma cacao
Thecc1EG002898 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 17248848-17249847 Theobroma cacao
Thecc1EG002898 2.0kb upstream 2.0kb upstream 3578 true scaffold_1: 17249848-17253425 Theobroma cacao
Thecc1EG002898 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 17251426-17253425 Theobroma cacao
Thecc1EG002898 2.0kb downstream 2.0kb downstream 3578 true scaffold_1: 17247848-17251425 Theobroma cacao
Thecc1EG002898 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 17247848-17249847 Theobroma cacao
Thecc1EG002898 5.0kb upstream 5.0kb upstream 6578 true scaffold_1: 17249848-17256425 Theobroma cacao
Thecc1EG002898 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 17251426-17256425 Theobroma cacao
Thecc1EG002898 5.0kb downstream 5.0kb downstream 6578 true scaffold_1: 17244848-17251425 Theobroma cacao
Thecc1EG002898 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 17244848-17249847 Theobroma cacao
Thecc1EG002898 10.0kb upstream 10.0kb upstream 11578 true scaffold_1: 17249848-17261425 Theobroma cacao
Thecc1EG002898 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 17251426-17261425 Theobroma cacao
Thecc1EG002898 10.0kb downstream 10.0kb downstream 11578 true scaffold_1: 17239848-17251425 Theobroma cacao
Thecc1EG002898 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 17239848-17249847 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121518621 5273 Angiosperm Singleton cluster - no MSA
123815390 5264 Brassicales-Malvales Singleton cluster - no MSA
124311824 5266 SBM Singleton cluster - no MSA
124161054 5268 Malvidae Singleton cluster - no MSA
123885050 5270 Rosid Singleton cluster - no MSA
123467619 5271 Pentapetalae Singleton cluster - no MSA
122502917 5272 Eudicot Singleton cluster - no MSA
120791434 5274 Embryophyte Singleton cluster - no MSA
122833053 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain