Gene : Thecc1EG002874 T. cacao v1.1
Defline:  (1 of 1) K13456 - RPM1-interacting protein 4 (RIN4) Genomic Order:  2165
Name:  ? Thecc1EG002874 Secondary Identifier:  ? PAC:27435735
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG002874 0.5kb upstream 0.5kb upstream 4991 true scaffold_1: 17095467-17100457 Theobroma cacao
Thecc1EG002874 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 17099958-17100457 Theobroma cacao
Thecc1EG002874 0.5kb downstream 0.5kb downstream 4991 true scaffold_1: 17094967-17099957 Theobroma cacao
Thecc1EG002874 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 17094967-17095466 Theobroma cacao
Thecc1EG002874 1.0kb upstream 1.0kb upstream 5491 true scaffold_1: 17095467-17100957 Theobroma cacao
Thecc1EG002874 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 17099958-17100957 Theobroma cacao
Thecc1EG002874 1.0kb downstream 1.0kb downstream 5491 true scaffold_1: 17094467-17099957 Theobroma cacao
Thecc1EG002874 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 17094467-17095466 Theobroma cacao
Thecc1EG002874 2.0kb upstream 2.0kb upstream 6491 true scaffold_1: 17095467-17101957 Theobroma cacao
Thecc1EG002874 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 17099958-17101957 Theobroma cacao
Thecc1EG002874 2.0kb downstream 2.0kb downstream 6491 true scaffold_1: 17093467-17099957 Theobroma cacao
Thecc1EG002874 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 17093467-17095466 Theobroma cacao
Thecc1EG002874 5.0kb upstream 5.0kb upstream 9491 true scaffold_1: 17095467-17104957 Theobroma cacao
Thecc1EG002874 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 17099958-17104957 Theobroma cacao
Thecc1EG002874 5.0kb downstream 5.0kb downstream 9491 true scaffold_1: 17090467-17099957 Theobroma cacao
Thecc1EG002874 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 17090467-17095466 Theobroma cacao
Thecc1EG002874 10.0kb upstream 10.0kb upstream 14491 true scaffold_1: 17095467-17109957 Theobroma cacao
Thecc1EG002874 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 17099958-17109957 Theobroma cacao
Thecc1EG002874 10.0kb downstream 10.0kb downstream 14491 true scaffold_1: 17085467-17099957 Theobroma cacao
Thecc1EG002874 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 17085467-17095466 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840811 5264 Brassicales-Malvales View MSA
124344601 5266 SBM View MSA
124250408 5268 Malvidae View MSA
124074816 5270 Rosid View MSA
123749229 5271 Pentapetalae View MSA
122795391 5272 Eudicot View MSA
122048165 5273 Angiosperm View MSA
121344169 5274 Embryophyte View MSA
123379991 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain