Gene : Thecc1EG002774 T. cacao v1.1

Defline:  (1 of 1) K15161 - cyclin C (CCNC, SSN8) Genomic Order:  2121
Name:  ? Thecc1EG002774 Secondary Identifier:  ? PAC:27436424

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG002774 0.5kb upstream 0.5kb upstream 7109 true scaffold_1: 16247205-16254313 Theobroma cacao
Thecc1EG002774 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 16253814-16254313 Theobroma cacao
Thecc1EG002774 0.5kb downstream 0.5kb downstream 7109 true scaffold_1: 16246705-16253813 Theobroma cacao
Thecc1EG002774 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 16246705-16247204 Theobroma cacao
Thecc1EG002774 1.0kb upstream 1.0kb upstream 7609 true scaffold_1: 16247205-16254813 Theobroma cacao
Thecc1EG002774 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 16253814-16254813 Theobroma cacao
Thecc1EG002774 1.0kb downstream 1.0kb downstream 7609 true scaffold_1: 16246205-16253813 Theobroma cacao
Thecc1EG002774 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 16246205-16247204 Theobroma cacao
Thecc1EG002774 2.0kb upstream 2.0kb upstream 8609 true scaffold_1: 16247205-16255813 Theobroma cacao
Thecc1EG002774 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 16253814-16255813 Theobroma cacao
Thecc1EG002774 2.0kb downstream 2.0kb downstream 8609 true scaffold_1: 16245205-16253813 Theobroma cacao
Thecc1EG002774 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 16245205-16247204 Theobroma cacao
Thecc1EG002774 5.0kb upstream 5.0kb upstream 11609 true scaffold_1: 16247205-16258813 Theobroma cacao
Thecc1EG002774 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 16253814-16258813 Theobroma cacao
Thecc1EG002774 5.0kb downstream 5.0kb downstream 11609 true scaffold_1: 16242205-16253813 Theobroma cacao
Thecc1EG002774 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 16242205-16247204 Theobroma cacao
Thecc1EG002774 10.0kb upstream 10.0kb upstream 16609 true scaffold_1: 16247205-16263813 Theobroma cacao
Thecc1EG002774 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 16253814-16263813 Theobroma cacao
Thecc1EG002774 10.0kb downstream 10.0kb downstream 16609 true scaffold_1: 16237205-16253813 Theobroma cacao
Thecc1EG002774 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 16237205-16247204 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836056 5264 Brassicales-Malvales View MSA
124346216 5266 SBM View MSA
124252715 5268 Malvidae View MSA
124062296 5270 Rosid View MSA
123737404 5271 Pentapetalae View MSA
122789356 5272 Eudicot View MSA
122042556 5273 Angiosperm View MSA
123429117 5275 Viridiplantae View MSA
121346319 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain