Gene : Thecc1EG002724 T. cacao v1.1
Defline:  (1 of 2) PTHR23315//PTHR23315:SF75 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 9 Genomic Order:  2090
Name:  ? Thecc1EG002724 Secondary Identifier:  ? PAC:27435471
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-7511 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG002724 0.5kb upstream 0.5kb upstream 3083 true scaffold_1: 15886380-15889462 Theobroma cacao
Thecc1EG002724 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 15888963-15889462 Theobroma cacao
Thecc1EG002724 0.5kb downstream 0.5kb downstream 3083 true scaffold_1: 15885880-15888962 Theobroma cacao
Thecc1EG002724 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 15885880-15886379 Theobroma cacao
Thecc1EG002724 1.0kb upstream 1.0kb upstream 3583 true scaffold_1: 15886380-15889962 Theobroma cacao
Thecc1EG002724 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 15888963-15889962 Theobroma cacao
Thecc1EG002724 1.0kb downstream 1.0kb downstream 3583 true scaffold_1: 15885380-15888962 Theobroma cacao
Thecc1EG002724 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 15885380-15886379 Theobroma cacao
Thecc1EG002724 2.0kb upstream 2.0kb upstream 4583 true scaffold_1: 15886380-15890962 Theobroma cacao
Thecc1EG002724 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 15888963-15890962 Theobroma cacao
Thecc1EG002724 2.0kb downstream 2.0kb downstream 4583 true scaffold_1: 15884380-15888962 Theobroma cacao
Thecc1EG002724 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 15884380-15886379 Theobroma cacao
Thecc1EG002724 5.0kb upstream 5.0kb upstream 7583 true scaffold_1: 15886380-15893962 Theobroma cacao
Thecc1EG002724 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 15888963-15893962 Theobroma cacao
Thecc1EG002724 5.0kb downstream 5.0kb downstream 7583 true scaffold_1: 15881380-15888962 Theobroma cacao
Thecc1EG002724 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 15881380-15886379 Theobroma cacao
Thecc1EG002724 10.0kb upstream 10.0kb upstream 12583 true scaffold_1: 15886380-15898962 Theobroma cacao
Thecc1EG002724 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 15888963-15898962 Theobroma cacao
Thecc1EG002724 10.0kb downstream 10.0kb downstream 12583 true scaffold_1: 15876380-15888962 Theobroma cacao
Thecc1EG002724 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 15876380-15886379 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029179 5273 Angiosperm View MSA
123835906 5264 Brassicales-Malvales View MSA
124342751 5266 SBM View MSA
124251189 5268 Malvidae View MSA
124071680 5270 Rosid View MSA
123745896 5271 Pentapetalae View MSA
122785914 5272 Eudicot View MSA
121350406 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain