Gene : Thecc1EG002613 T. cacao v1.1
Defline:  (1 of 1) 2.1.1.226//2.1.1.227 - 23S rRNA (cytidine(1920)-2'-O)-methyltransferase // 16S rRNA (cytidine(1409)-2'-O)-methyltransferase Genomic Order:  2018
Name:  ? Thecc1EG002613 Secondary Identifier:  ? PAC:27431690
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG002613 0.5kb upstream 0.5kb upstream 4056 true scaffold_1: 15147707-15151762 Theobroma cacao
Thecc1EG002613 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 15151263-15151762 Theobroma cacao
Thecc1EG002613 0.5kb downstream 0.5kb downstream 4056 true scaffold_1: 15147207-15151262 Theobroma cacao
Thecc1EG002613 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 15147207-15147706 Theobroma cacao
Thecc1EG002613 1.0kb upstream 1.0kb upstream 4556 true scaffold_1: 15147707-15152262 Theobroma cacao
Thecc1EG002613 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 15151263-15152262 Theobroma cacao
Thecc1EG002613 1.0kb downstream 1.0kb downstream 4556 true scaffold_1: 15146707-15151262 Theobroma cacao
Thecc1EG002613 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 15146707-15147706 Theobroma cacao
Thecc1EG002613 2.0kb upstream 2.0kb upstream 5556 true scaffold_1: 15147707-15153262 Theobroma cacao
Thecc1EG002613 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 15151263-15153262 Theobroma cacao
Thecc1EG002613 2.0kb downstream 2.0kb downstream 5556 true scaffold_1: 15145707-15151262 Theobroma cacao
Thecc1EG002613 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 15145707-15147706 Theobroma cacao
Thecc1EG002613 5.0kb upstream 5.0kb upstream 8556 true scaffold_1: 15147707-15156262 Theobroma cacao
Thecc1EG002613 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 15151263-15156262 Theobroma cacao
Thecc1EG002613 5.0kb downstream 5.0kb downstream 8556 true scaffold_1: 15142707-15151262 Theobroma cacao
Thecc1EG002613 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 15142707-15147706 Theobroma cacao
Thecc1EG002613 10.0kb upstream 10.0kb upstream 13556 true scaffold_1: 15147707-15161262 Theobroma cacao
Thecc1EG002613 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 15151263-15161262 Theobroma cacao
Thecc1EG002613 10.0kb downstream 10.0kb downstream 13556 true scaffold_1: 15137707-15151262 Theobroma cacao
Thecc1EG002613 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 15137707-15147706 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832094 5264 Brassicales-Malvales View MSA
124341535 5266 SBM View MSA
124237526 5268 Malvidae View MSA
124068570 5270 Rosid View MSA
123739916 5271 Pentapetalae View MSA
122785847 5272 Eudicot View MSA
122047844 5273 Angiosperm View MSA
121347499 5274 Embryophyte View MSA
123424173 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain