Gene : Thecc1EG002614 T. cacao v1.1
Defline:  (1 of 2) K02699 - photosystem I subunit XI (psaL) Genomic Order:  2019
Name:  ? Thecc1EG002614 Secondary Identifier:  ? PAC:27437418
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PHOTOALL-PWY Theobroma cacao pathologic  
Tcacao PWY-101 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG002614 0.5kb upstream 0.5kb upstream 1682 true scaffold_1: 15154927-15156608 Theobroma cacao
Thecc1EG002614 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 15154927-15155426 Theobroma cacao
Thecc1EG002614 0.5kb downstream 0.5kb downstream 1682 true scaffold_1: 15155427-15157108 Theobroma cacao
Thecc1EG002614 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 15156609-15157108 Theobroma cacao
Thecc1EG002614 1.0kb upstream 1.0kb upstream 2182 true scaffold_1: 15154427-15156608 Theobroma cacao
Thecc1EG002614 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 15154427-15155426 Theobroma cacao
Thecc1EG002614 1.0kb downstream 1.0kb downstream 2182 true scaffold_1: 15155427-15157608 Theobroma cacao
Thecc1EG002614 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 15156609-15157608 Theobroma cacao
Thecc1EG002614 2.0kb upstream 2.0kb upstream 3182 true scaffold_1: 15153427-15156608 Theobroma cacao
Thecc1EG002614 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 15153427-15155426 Theobroma cacao
Thecc1EG002614 2.0kb downstream 2.0kb downstream 3182 true scaffold_1: 15155427-15158608 Theobroma cacao
Thecc1EG002614 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 15156609-15158608 Theobroma cacao
Thecc1EG002614 5.0kb upstream 5.0kb upstream 6182 true scaffold_1: 15150427-15156608 Theobroma cacao
Thecc1EG002614 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 15150427-15155426 Theobroma cacao
Thecc1EG002614 5.0kb downstream 5.0kb downstream 6182 true scaffold_1: 15155427-15161608 Theobroma cacao
Thecc1EG002614 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 15156609-15161608 Theobroma cacao
Thecc1EG002614 10.0kb upstream 10.0kb upstream 11182 true scaffold_1: 15145427-15156608 Theobroma cacao
Thecc1EG002614 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 15145427-15155426 Theobroma cacao
Thecc1EG002614 10.0kb downstream 10.0kb downstream 11182 true scaffold_1: 15155427-15166608 Theobroma cacao
Thecc1EG002614 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 15156609-15166608 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040995 5273 Angiosperm View MSA
123838077 5264 Brassicales-Malvales View MSA
124343130 5266 SBM View MSA
124243038 5268 Malvidae View MSA
124061167 5270 Rosid View MSA
123750401 5271 Pentapetalae View MSA
122793402 5272 Eudicot View MSA
121343870 5274 Embryophyte View MSA
123424325 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain